RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 NOC2LQ9Y3T9 749 aaKnown RBP25.8■■□□□ 1.72
PTPN4-208ENST00000460289 EVPLQ92817 2033 aa25.8■■□□□ 1.72
PTPN4-208ENST00000460289 WDR81Q562E7 1941 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 MCM2P49736 904 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 DNM2P50570 870 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 NLRP11P59045 1033 aaKnown RBP25.79■■□□□ 1.72
PTPN4-208ENST00000460289 GNL2Q13823 731 aaKnown RBP25.79■■□□□ 1.72
PTPN4-208ENST00000460289 TMEM266Q2M3C6 531 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 NCAPH2Q6IBW4 605 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 RTN4RL1Q86UN2 441 aaPredicted RBP25.79■■□□□ 1.72
PTPN4-208ENST00000460289 PPM1EQ8WY54 764 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 OSMRQ99650 979 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 ERVK-5Q9HDB9 667 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 ST3GAL5Q9UNP4 418 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 KIF3AQ9Y496 699 aa25.79■■□□□ 1.72
PTPN4-208ENST00000460289 EPOPA6NHQ4 379 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 SPIRE1Q08AE8 756 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 ANO5Q75V66 913 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 EXOC8Q8IYI6 725 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 TMEM40Q8WWA1 233 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 SAMD11Q96NU1 681 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 CEP89Q96ST8 783 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 PPP1R16BQ96T49 567 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 JPH2Q9BR39 696 aaPredicted RBP25.78■■□□□ 1.72
PTPN4-208ENST00000460289 RNF216Q9NWF9 866 aaPredicted RBP25.78■■□□□ 1.72
PTPN4-208ENST00000460289 MTUS1Q9ULD2 1270 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 PPME1Q9Y570 386 aa25.78■■□□□ 1.72
PTPN4-208ENST00000460289 IGKV6-21A0A0C4DH24 114 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 MAFO75444 373 aaPredicted RBP25.77■■□□□ 1.72
PTPN4-208ENST00000460289 STAG3L1P0CL83 205 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 ATP2B1P20020 1258 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 OTUD6AQ7L8S5 288 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 SPRED2Q7Z698 418 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 C4orf19Q8IY42 314 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 LINC01599Q8WXQ3 324 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 MTMR9Q96QG7 549 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 ADAMTS10Q9H324 1103 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 TMX1Q9H3N1 280 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 ZSWIM4Q9H7M6 989 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 TTC12Q9H892 705 aaPredicted RBP25.77■■□□□ 1.72
PTPN4-208ENST00000460289 MTCH2Q9Y6C9 303 aa25.77■■□□□ 1.72
PTPN4-208ENST00000460289 TMEM150BA6NC51 233 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 EIF4BP23588 611 aaKnown RBP25.76■■□□□ 1.71
PTPN4-208ENST00000460289 TXKP42681 527 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 GRB10Q13322 594 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 ORC2Q13416 577 aaPredicted RBP25.76■■□□□ 1.71
PTPN4-208ENST00000460289 CCDC85BQ15834 202 aaPredicted RBP25.76■■□□□ 1.71
PTPN4-208ENST00000460289 FIBCD1Q8N539 461 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 TMX3Q96JJ7 454 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 SH2D3AQ9BRG2 576 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 LXNQ9BS40 222 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 CYP26B1Q9NR63 512 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 LMCD1Q9NZU5 365 aa25.76■■□□□ 1.71
PTPN4-208ENST00000460289 DENND3A2RUS2 1198 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 MCM7P33993 719 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 GPC3P51654 580 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 NPAS4Q8IUM7 802 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 NOSTRINQ8IVI9 506 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 DYDC2Q96IM9 177 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 CEP170P1Q96L14 293 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 SCLT1Q96NL6 688 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 C17orf80Q9BSJ5 609 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 C1orf112Q9NSG2 853 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 RGL1Q9NZL6 768 aa25.75■■□□□ 1.71
PTPN4-208ENST00000460289 WNT7AO00755 349 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 LPXNO60711 386 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 DGKIO75912 1065 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 YWHABP31946 246 aaKnown RBP25.74■■□□□ 1.71
PTPN4-208ENST00000460289 SLC24A5Q71RS6 500 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 FAM228AQ86W67 206 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 TPH2Q8IWU9 490 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 CRIPAKQ8N1N5 446 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 FBXO22Q8NEZ5 403 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 NEK9Q8TD19 979 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 NLRP7Q8WX94 980 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 SLC7A3Q8WY07 619 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 ZNF689Q96CS4 500 aaPredicted RBP25.74■■□□□ 1.71
PTPN4-208ENST00000460289 ADAM2Q99965 735 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 RGS18Q9NS28 235 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 LRFN2Q9ULH4 789 aa25.74■■□□□ 1.71
PTPN4-208ENST00000460289 TTC3P53804 2025 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 LOXHD1Q8IVV2 1947 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 SLITRK3O94933 977 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 TRAPPC10P48553 1259 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 SARSP49591 514 aaKnown RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 CYP4A11Q02928 519 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 CTTNQ14247 550 aaKnown RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 PLA2G4FQ68DD2 849 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 TMEM192Q8IY95 271 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 MICALL1Q8N3F8 863 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 HSD17B14Q9BPX1 270 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 EIF2AK1Q9BQI3 630 aaKnown RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 RC3H2Q9HBD1 1191 aaKnown RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 SUCLA2Q9P2R7 463 aaPredicted RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 WRAP73Q9P2S5 460 aaPredicted RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 NOL7Q9UMY1 257 aaKnown RBP25.73■■□□□ 1.71
PTPN4-208ENST00000460289 RWDD3Q9Y3V2 267 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 PCDHB7Q9Y5E2 793 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 EYSQ5T1H1 3165 aa25.73■■□□□ 1.71
PTPN4-208ENST00000460289 COL4A6Q14031 1691 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms