RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 ATF3P18847 181 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 FBLN1P23142 703 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 GLRBP48167 497 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 MLC1Q15049 377 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC50-203ENST00000460064 PITRM1Q5JRX3 1037 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 FAM102BQ5T8I3 360 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 PRR23BQ6ZRT6 265 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 KANSL1Q7Z3B3 1105 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 SMARCC2Q8TAQ2 1214 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 JADE3Q92613 823 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 RPGRQ92834 1020 aaKnown RBP7.2□□□□□ -1.26
CCDC50-203ENST00000460064 RAX2Q96IS3 184 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 SLC2A13Q96QE2 648 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 EPB41L4BQ9H329 900 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 CNTD2Q9H8S5 307 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 KCNK12Q9HB15 430 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 DLL4Q9NR61 685 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 ARHGAP20Q9P2F6 1191 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 NUMBLQ9Y6R0 609 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 MYPNQ86TC9 1320 aa7.2□□□□□ -1.26
CCDC50-203ENST00000460064 GOLGA6CA6NDK9 693 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 GOLGA6BA6NDN3 693 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 MAFGO15525 162 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
CCDC50-203ENST00000460064 PEX10O60683 326 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 IL33O95760 270 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 GOLGA6DP0CG33 693 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 OSMP13725 252 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 MTHFD2P13995 350 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 JUNBP17275 347 aaPredicted RBP7.19□□□□□ -1.26
CCDC50-203ENST00000460064 ITGB5P18084 799 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 THBS2P35442 1172 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 LGALS4P56470 323 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 BCAR1P56945 870 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 MRPS9P82933 396 aaKnown RBP7.19□□□□□ -1.26
CCDC50-203ENST00000460064 HTRA3P83110 453 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TCIRG1Q13488 830 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TMEM240Q5SV17 173 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 PHF19Q5T6S3 580 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TPH2Q8IWU9 490 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TCEAL8Q8IYN2 117 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 HSPBAP1Q96EW2 488 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TEKT5Q96M29 485 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TMEM209Q96SK2 561 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 BTBD2Q9BX70 525 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 MCOLN1Q9GZU1 580 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 GOLGA6AQ9NYA3 693 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 FAM53CQ9NYF3 392 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 TMPRSS11EQ9UL52 423 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 PNMA8BQ9ULN7 279 aaPredicted RBP7.19□□□□□ -1.26
CCDC50-203ENST00000460064 PCDHA5Q9Y5H7 936 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 GPR45Q9Y5Y3 372 aa7.19□□□□□ -1.26
CCDC50-203ENST00000460064 MYOCOSA0A1B0GUC4 107 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 KIF3BO15066 747 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 PCDH8O95206 1070 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 VCAM1P19320 739 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 AGXTP21549 392 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 APEX1P27695 318 aaKnown RBP7.18□□□□□ -1.26
CCDC50-203ENST00000460064 MTNR1BP49286 362 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 CDR1P51861 262 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 NXNQ6DKJ4 435 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 DPP8Q6V1X1 898 aaPredicted RBP7.18□□□□□ -1.26
CCDC50-203ENST00000460064 KCNK18Q7Z418 384 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 CMTR2Q8IYT2 770 aaKnown RBP7.18□□□□□ -1.26
CCDC50-203ENST00000460064 DTX3Q8N9I9 347 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 TTC8Q8TAM2 541 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 MZB1Q8WU39 189 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 AUTS2Q8WXX7 1259 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 TACO1Q9BSH4 297 aaKnown RBP7.18□□□□□ -1.26
CCDC50-203ENST00000460064 SGPP1Q9BX95 441 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 OR10A5Q9H207 317 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 KCTD10Q9H3F6 313 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 MBD1Q9UIS9 605 aaPredicted RBP7.18□□□□□ -1.26
CCDC50-203ENST00000460064 USP18Q9UMW8 372 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 CARMIL2Q6F5E8 1435 aa7.18□□□□□ -1.26
CCDC50-203ENST00000460064 TEX51A0A1B0GUA7 166 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 PRC1O43663 620 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 U2AF1L5P0DN76 240 aaPredicted RBP7.17□□□□□ -1.26
CCDC50-203ENST00000460064 CYP2C19P33261 490 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 IRAK1P51617 712 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 CDK17Q00537 523 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 U2AF1Q01081 240 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC50-203ENST00000460064 TRIM25Q14258 630 aaKnown RBP7.17□□□□□ -1.26
CCDC50-203ENST00000460064 MLANAQ16655 118 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 B3GNT8Q7Z7M8 397 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 MAGEB6Q8N7X4 407 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 PPM1NQ8N819 430 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 SSH1Q8WYL5 1049 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 PRDM12Q9H4Q4 367 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 GABBR1Q9UBS5 961 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 DPP7Q9UHL4 492 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 PRSS50Q9UI38 385 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 ZFP69BQ9UJL9 534 aa7.17□□□□□ -1.26
CCDC50-203ENST00000460064 LRRC10BA6NIK2 292 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 IL18BPO95998 194 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 PFKMP08237 780 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 SLC5A3P53794 718 aa7.16□□□□□ -1.26
CCDC50-203ENST00000460064 ITGA1P56199 1179 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms