RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 B3GNT9Q6UX72 402 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 PIK3AP1Q6ZUJ8 805 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 CRIPAKQ8N1N5 446 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 LRRC71Q8N4P6 559 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 MAP7D2Q96T17 732 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 ST3GAL5Q9UNP4 418 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 RWDD3Q9Y3V2 267 aa23.53■■□□□ 1.36
SRM-202ENST00000459997 TTC28Q96AY4 2481 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 DENND3A2RUS2 1198 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 GPR182O15218 404 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 MGEA5O60502 916 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 BMP1P13497 986 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 FDPSP14324 419 aaKnown RBP23.52■■□□□ 1.36
SRM-202ENST00000459997 BMPR1AP36894 532 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 LINC01465Q8N7H1 131 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 CLP1Q92989 425 aaKnown RBP23.52■■□□□ 1.36
SRM-202ENST00000459997 UHRF1Q96T88 793 aaPredicted RBP23.52■■□□□ 1.36
SRM-202ENST00000459997 SEPT9Q9UHD8 586 aaPredicted RBP23.52■■□□□ 1.36
SRM-202ENST00000459997 LRFN2Q9ULH4 789 aa23.52■■□□□ 1.36
SRM-202ENST00000459997 C5orf67F2Z3F1 127 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 TNFRSF10AO00220 468 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 GCFC2P16383 781 aaKnown RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 SARSP49591 514 aaKnown RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 NLRP11P59045 1033 aaKnown RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 TBC1D8BQ0IIM8 1120 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 PPP4R3AQ6IN85 833 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 FAM43BQ6ZT52 329 aaPredicted RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 FAM228AQ86W67 206 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 CMTR2Q8IYT2 770 aaKnown RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 ADAM2Q99965 735 aa23.51■■□□□ 1.35
SRM-202ENST00000459997 C11orf84Q9BUA3 381 aaPredicted RBP23.51■■□□□ 1.35
SRM-202ENST00000459997 CCNT1O60563 726 aaKnown RBP23.5■■□□□ 1.35
SRM-202ENST00000459997 RB1P06400 928 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 KRT2P35908 639 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 PAN2Q504Q3 1202 aaKnown RBP23.5■■□□□ 1.35
SRM-202ENST00000459997 TIGD5Q53EQ6 642 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 BANK1Q8NDB2 785 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 NSUN7Q8NE18 718 aaKnown RBP23.5■■□□□ 1.35
SRM-202ENST00000459997 KCNMB3Q9NPA1 279 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 RGS18Q9NS28 235 aa23.5■■□□□ 1.35
SRM-202ENST00000459997 MRPL42Q9Y6G3 142 aaKnown RBP23.5■■□□□ 1.35
SRM-202ENST00000459997 TMEM150BA6NC51 233 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 TARBP2Q15633 366 aaKnown RBP23.49■■□□□ 1.35
SRM-202ENST00000459997 MTERF2Q49AM1 385 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 XKR3Q5GH77 459 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 EARS2Q5JPH6 523 aaKnown RBP23.49■■□□□ 1.35
SRM-202ENST00000459997 FAM20AQ96MK3 541 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 NAP1L4Q99733 375 aaKnown RBP23.49■■□□□ 1.35
SRM-202ENST00000459997 NIFKQ9BYG3 293 aaKnown RBP23.49■■□□□ 1.35
SRM-202ENST00000459997 ADAMTS10Q9H324 1103 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 BRMS1Q9HCU9 246 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 C1orf112Q9NSG2 853 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 VAV3Q9UKW4 847 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 PCDHB7Q9Y5E2 793 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 KIAA1671Q9BY89 1806 aa23.49■■□□□ 1.35
SRM-202ENST00000459997 TCF20Q9UGU0 1960 aaKnown RBP23.49■■□□□ 1.35
SRM-202ENST00000459997 FAM205CA6NFA0 338 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 GATMP50440 423 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 NR5A1Q13285 461 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 PPP2R5CQ13362 524 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 SLC24A5Q71RS6 500 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 ZNF710Q8N1W2 664 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 ZNF668Q96K58 619 aaPredicted RBP23.48■■□□□ 1.35
SRM-202ENST00000459997 SCLT1Q96NL6 688 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 NECAB3Q96P71 396 aaPredicted RBP23.48■■□□□ 1.35
SRM-202ENST00000459997 SH2D3AQ9BRG2 576 aa23.48■■□□□ 1.35
SRM-202ENST00000459997 UBE2ZQ9H832 354 aaPredicted RBP23.48■■□□□ 1.35
SRM-202ENST00000459997 RNF216Q9NWF9 866 aaPredicted RBP23.48■■□□□ 1.35
SRM-202ENST00000459997 DDX11L8A8MPP1 907 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 EML1O00423 815 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 GRM6O15303 877 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 MARCH6O60337 910 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 JAK2O60674 1132 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 STBD1O95210 358 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 FOSBP53539 338 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 PSMC5P62195 406 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 PLVAPQ9BX97 442 aa23.47■■□□□ 1.35
SRM-202ENST00000459997 C9IYK1 514 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 TBX3O15119 743 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 EIF4BP23588 611 aaKnown RBP23.46■■□□□ 1.35
SRM-202ENST00000459997 GPC3P51654 580 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 C8orf34Q49A92 452 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 TCEAL5Q5H9L2 206 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 POTEDQ86YR6 584 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 HAS1Q92839 578 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 TNFRSF25Q93038 417 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 CEP89Q96ST8 783 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 LMAN2LQ9H0V9 348 aa23.46■■□□□ 1.35
SRM-202ENST00000459997 NSUN3Q9H649 340 aaKnown RBP23.46■■□□□ 1.35
SRM-202ENST00000459997 ATG2AQ2TAZ0 1938 aa23.45■■□□□ 1.35
SRM-202ENST00000459997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.45■■□□□ 1.34
SRM-202ENST00000459997 DRP2Q13474 957 aa23.45■■□□□ 1.34
SRM-202ENST00000459997 TRIM29Q14134 588 aa23.45■■□□□ 1.34
SRM-202ENST00000459997 DSC3Q14574 896 aa23.45■■□□□ 1.34
SRM-202ENST00000459997 ANO5Q75V66 913 aa23.45■■□□□ 1.34
SRM-202ENST00000459997 NLRP7Q8WX94 980 aa23.45■■□□□ 1.34
SRM-202ENST00000459997 MUC3AQ02505 3323 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 CSPG5O95196 566 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 MMP1P03956 469 aa23.44■■□□□ 1.34
SRM-202ENST00000459997 DARSP14868 501 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms