RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 CEP170P1Q96L14 293 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 HSD17B14Q9BPX1 270 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 PRDM12Q9H4Q4 367 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 SUGCTQ9HAC7 445 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 TUFT1Q9NNX1 390 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 CYP26B1Q9NR63 512 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 LRWD1Q9UFC0 647 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 AKT3Q9Y243 479 aa24.32■■□□□ 1.48
SSNA1-202ENST00000459860 MYH15Q9Y2K3 1946 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 TMEM150BA6NC51 233 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 STBD1O95210 358 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 DNM2P50570 870 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 CLCN3P51790 818 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 ATP2C1P98194 919 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-202ENST00000459860 ADGRE1Q14246 886 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 BECN1Q14457 450 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 KIAA0319LQ8IZA0 1049 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 SLC7A3Q8WY07 619 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 APBB2Q92870 758 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 CELF4Q9BZC1 486 aaKnown RBP24.31■■□□□ 1.48
SSNA1-202ENST00000459860 ZSCAN16Q9H4T2 348 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-202ENST00000459860 PRDM6Q9NQX0 595 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 WRAP73Q9P2S5 460 aaPredicted RBP24.31■■□□□ 1.48
SSNA1-202ENST00000459860 MTMR6Q9Y217 621 aa24.31■■□□□ 1.48
SSNA1-202ENST00000459860 YBX2Q9Y2T7 364 aaKnown RBP24.31■■□□□ 1.48
SSNA1-202ENST00000459860 ABHD14A-ACY1A0A1B0GW23 586 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 LYPLA2O95372 231 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 GHRP10912 638 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 POLGP54098 1239 aaPredicted RBP24.3■■□□□ 1.48
SSNA1-202ENST00000459860 RESTQ13127 1097 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 PDIA5Q14554 519 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 RAB30Q15771 203 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 PLEKHG4Q58EX7 1191 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 XKR9Q5GH70 373 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 ZNF710Q8N1W2 664 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 LRRC71Q8N4P6 559 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 SPRYD3Q8NCJ5 442 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 SH2D3AQ9BRG2 576 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 POLR3CQ9BUI4 534 aaPredicted RBP24.3■■□□□ 1.48
SSNA1-202ENST00000459860 IFIH1Q9BYX4 1025 aaKnown RBP24.3■■□□□ 1.48
SSNA1-202ENST00000459860 GINS2Q9Y248 185 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 MICAL3Q7RTP6 2002 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 KDM3AQ9Y4C1 1321 aa24.3■■□□□ 1.48
SSNA1-202ENST00000459860 RFC5P40937 340 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 FBXO47Q5MNV8 452 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 TSHZ1Q6ZSZ6 1077 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 DBF4BQ8NFT6 615 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 SLC9A7Q96T83 725 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 NKX2-4Q9H2Z4 354 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 ANKEF1Q9NU02 776 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 MSRAQ9UJ68 235 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 SQORQ9Y6N5 450 aa24.29■■□□□ 1.48
SSNA1-202ENST00000459860 MAFO75444 373 aaPredicted RBP24.28■■□□□ 1.48
SSNA1-202ENST00000459860 VTNP04004 478 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 RPA1P27694 616 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 NPEPPSP55786 919 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 LPIN1Q14693 890 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 ARL6IP4Q66PJ3 421 aaKnown RBP24.28■■□□□ 1.48
SSNA1-202ENST00000459860 IGSF22Q8N9C0 903 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 SCLT1Q96NL6 688 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 GAS2L1Q99501 681 aaPredicted RBP24.28■■□□□ 1.48
SSNA1-202ENST00000459860 MUC3AQ02505 3323 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 GBF1Q92538 1859 aa24.28■■□□□ 1.48
SSNA1-202ENST00000459860 GAS2O43903 313 aaKnown RBP24.27■■□□□ 1.48
SSNA1-202ENST00000459860 ATP2A2P16615 1042 aaKnown RBP24.27■■□□□ 1.48
SSNA1-202ENST00000459860 MUTP22033 750 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 CCT6AP40227 531 aaKnown RBP24.27■■□□□ 1.48
SSNA1-202ENST00000459860 TJAP1Q5JTD0 557 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 ODR4Q5SWX8 454 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 KRT79Q5XKE5 535 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 CATSPER3Q86XQ3 398 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 LINC01465Q8N7H1 131 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 SNX29Q8TEQ0 813 aa24.27■■□□□ 1.48
SSNA1-202ENST00000459860 SYMPKQ92797 1274 aaKnown RBP24.27■■□□□ 1.48
SSNA1-202ENST00000459860 CHD7Q9P2D1 2997 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 MED24O75448 989 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 XRCC6P12956 609 aaKnown RBP eCLIP24.26■■□□□ 1.47
SSNA1-202ENST00000459860 WDR5P61964 334 aaKnown RBP24.26■■□□□ 1.47
SSNA1-202ENST00000459860 CDC42EP1Q00587 391 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 PAK2Q13177 524 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 SF3A1Q15459 793 aaKnown RBP24.26■■□□□ 1.47
SSNA1-202ENST00000459860 KIZQ2M2Z5 673 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 NACC1Q96RE7 527 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 CEP89Q96ST8 783 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 PPP1R16BQ96T49 567 aa24.26■■□□□ 1.47
SSNA1-202ENST00000459860 IGKV6-21A0A0C4DH24 114 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 VWA3AA6NCI4 1184 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 SPATA31C1P0DKV0 1188 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 RABGGTBP53611 331 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 CRYBB1P53674 252 aaPredicted RBP24.25■■□□□ 1.47
SSNA1-202ENST00000459860 POTEGQ6S5H5 508 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 PHOSPHO2Q8TCD6 241 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 TCP11Q8WWU5 503 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 OSMRQ99650 979 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 PTPRSQ13332 1948 aa24.25■■□□□ 1.47
SSNA1-202ENST00000459860 TTC28Q96AY4 2481 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 AMHP03971 560 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 CD52P31358 61 aa24.24■■□□□ 1.47
SSNA1-202ENST00000459860 NLRP11P59045 1033 aaKnown RBP24.24■■□□□ 1.47
SSNA1-202ENST00000459860 EMC2Q15006 297 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms