RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 CDHR5Q9HBB8 845 aa18.11■□□□□ 0.49
COL7A1-203ENST00000459756 ERVK-5Q9HDB9 667 aa18.11■□□□□ 0.49
COL7A1-203ENST00000459756 MTUS1Q9ULD2 1270 aa18.11■□□□□ 0.49
COL7A1-203ENST00000459756 AKT3Q9Y243 479 aa18.11■□□□□ 0.49
COL7A1-203ENST00000459756 COL4A4P53420 1690 aaPredicted RBP18.1■□□□□ 0.49
COL7A1-203ENST00000459756 GPR182O15218 404 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 ST18O60284 1047 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 LPXNO60711 386 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 QARSP47897 775 aaKnown RBP18.1■□□□□ 0.49
COL7A1-203ENST00000459756 NFX1Q12986 1120 aaKnown RBP18.1■□□□□ 0.49
COL7A1-203ENST00000459756 TMEM266Q2M3C6 531 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 RTN4RL1Q86UN2 441 aaPredicted RBP18.1■□□□□ 0.49
COL7A1-203ENST00000459756 LRRC71Q8N4P6 559 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 TMEM40Q8WWA1 233 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 OSMRQ99650 979 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 LMCD1Q9NZU5 365 aa18.1■□□□□ 0.49
COL7A1-203ENST00000459756 NOC2LQ9Y3T9 749 aaKnown RBP18.1■□□□□ 0.49
COL7A1-203ENST00000459756 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 P4HBP07237 508 aaKnown RBP18.09■□□□□ 0.49
COL7A1-203ENST00000459756 NLRP11P59045 1033 aaKnown RBP18.09■□□□□ 0.49
COL7A1-203ENST00000459756 EPHA7Q15375 998 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 MTERF2Q49AM1 385 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 NPAS4Q8IUM7 802 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 MICALL1Q8N3F8 863 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 FIBCD1Q8N539 461 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 FBXO22Q8NEZ5 403 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 GDPD5Q8WTR4 605 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 PPP1R16BQ96T49 567 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 C17orf80Q9BSJ5 609 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 RC3H2Q9HBD1 1191 aaKnown RBP18.09■□□□□ 0.49
COL7A1-203ENST00000459756 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
COL7A1-203ENST00000459756 PRRC2BQ5JSZ5 2229 aaKnown RBP18.08■□□□□ 0.49
COL7A1-203ENST00000459756 ADGRA3Q8IWK6 1321 aa18.08■□□□□ 0.49
COL7A1-203ENST00000459756 TMEM150BA6NC51 233 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 NEMFO60524 1076 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 DGKIO75912 1065 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 STAG3L1P0CL83 205 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 DNM2P50570 870 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 CDC42EP1Q00587 391 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 GUCY1B3Q02153 619 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 SPIRE1Q08AE8 756 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 CALCRLQ16602 461 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 NCAPH2Q6IBW4 605 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 ANO5Q75V66 913 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 CRIPAKQ8N1N5 446 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 FAM184AQ8NB25 1140 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 FBXO18Q8NFZ0 1043 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 CEP89Q96ST8 783 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 ADAMTS10Q9H324 1103 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 FOXP1Q9H334 677 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-203ENST00000459756 C1orf112Q9NSG2 853 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
COL7A1-203ENST00000459756 PCDHA12Q9UN75 941 aa18.08■□□□□ 0.48
COL7A1-203ENST00000459756 IGKV6-21A0A0C4DH24 114 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 DENND3A2RUS2 1198 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 MAFO75444 373 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-203ENST00000459756 EIF4BP23588 611 aaKnown RBP18.07■□□□□ 0.48
COL7A1-203ENST00000459756 EPC2Q52LR7 807 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 FAM228AQ86W67 206 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 TMEM192Q8IY95 271 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 ZNF689Q96CS4 500 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-203ENST00000459756 ADAM2Q99965 735 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 JPH2Q9BR39 696 aaPredicted RBP18.07■□□□□ 0.48
COL7A1-203ENST00000459756 LXNQ9BS40 222 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 THEGQ9P2T0 379 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 RWDD3Q9Y3V2 267 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 PPME1Q9Y570 386 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 VCANP13611 3396 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 RALGAPA2Q2PPJ7 1873 aa18.07■□□□□ 0.48
COL7A1-203ENST00000459756 NLRC5Q86WI3 1866 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 DLL1O00548 723 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 SARSP49591 514 aaKnown RBP18.06■□□□□ 0.48
COL7A1-203ENST00000459756 GPC3P51654 580 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 BTG3Q14201 252 aaPredicted RBP18.06■□□□□ 0.48
COL7A1-203ENST00000459756 C4orf19Q8IY42 314 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 EXOC8Q8IYI6 725 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 SCLT1Q96NL6 688 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 SH2D3AQ9BRG2 576 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 ZSWIM4Q9H7M6 989 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 PRDM6Q9NQX0 595 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 CYP26B1Q9NR63 512 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 RGS18Q9NS28 235 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 LRFN2Q9ULH4 789 aa18.06■□□□□ 0.48
COL7A1-203ENST00000459756 H3BNC9 293 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 WNT7AO00755 349 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 MGEA5O60502 916 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 PLA2G4FQ68DD2 849 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 SLC24A5Q71RS6 500 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 OTUD6AQ7L8S5 288 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 CMTR2Q8IYT2 770 aaKnown RBP18.05■□□□□ 0.48
COL7A1-203ENST00000459756 ATXN2LQ8WWM7 1075 aaKnown RBP18.05■□□□□ 0.48
COL7A1-203ENST00000459756 SLC7A3Q8WY07 619 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 CLP1Q92989 425 aaKnown RBP18.05■□□□□ 0.48
COL7A1-203ENST00000459756 MTMR9Q96QG7 549 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 TTC12Q9H892 705 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-203ENST00000459756 RGL1Q9NZL6 768 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 WRAP73Q9P2S5 460 aaPredicted RBP18.05■□□□□ 0.48
COL7A1-203ENST00000459756 PCDHB7Q9Y5E2 793 aa18.05■□□□□ 0.48
COL7A1-203ENST00000459756 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms