RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 PAK2Q13177 524 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 GRIN2CQ14957 1233 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 KIZQ2M2Z5 673 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 LARP1BQ659C4 914 aaKnown RBP23.23■■□□□ 1.31
VARS-218ENST00000459667 FAM117BQ6P1L5 589 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 NEK9Q8TD19 979 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
VARS-218ENST00000459667 SLITRK3O94933 977 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 YWHABP31946 246 aaKnown RBP23.22■■□□□ 1.31
VARS-218ENST00000459667 TOB1P50616 345 aaPredicted RBP23.22■■□□□ 1.31
VARS-218ENST00000459667 TPH2Q8IWU9 490 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 TMEM40Q8WWA1 233 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 CEP170P1Q96L14 293 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 OSMRQ99650 979 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 PADI3Q9ULW8 664 aa23.22■■□□□ 1.31
VARS-218ENST00000459667 GPR32O75388 356 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 MAFO75444 373 aaPredicted RBP23.21■■□□□ 1.31
VARS-218ENST00000459667 CRYBB1P53674 252 aaPredicted RBP23.21■■□□□ 1.31
VARS-218ENST00000459667 NPEPPSP55786 919 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 TMEM266Q2M3C6 531 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 MYLIPQ8WY64 445 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 RAD9AQ99638 391 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 HSD17B14Q9BPX1 270 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 STXBP5LQ9Y2K9 1186 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 NOC2LQ9Y3T9 749 aaKnown RBP23.21■■□□□ 1.31
VARS-218ENST00000459667 PPME1Q9Y570 386 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 PCDHB6Q9Y5E3 794 aa23.21■■□□□ 1.31
VARS-218ENST00000459667 ARID2Q68CP9 1835 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 IGKV6-21A0A0C4DH24 114 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 K7ELQ4 463 aaPredicted RBP23.2■■□□□ 1.3
VARS-218ENST00000459667 RPS6KA5O75582 802 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 TECP42680 631 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 NLRP11P59045 1033 aaKnown RBP23.2■■□□□ 1.3
VARS-218ENST00000459667 DRP2Q13474 957 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 RILPL1Q5EBL4 403 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 OTUD6AQ7L8S5 288 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 ZNF710Q8N1W2 664 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 TOP1MTQ969P6 601 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 JPH2Q9BR39 696 aaPredicted RBP23.2■■□□□ 1.3
VARS-218ENST00000459667 FTHL17Q9BXU8 183 aa23.2■■□□□ 1.3
VARS-218ENST00000459667 LCHNA4D1U4 455 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 UPP2O95045 317 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 LYPLA2O95372 231 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 DNM2P50570 870 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 GPC3P51654 580 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 NFX1Q12986 1120 aaKnown RBP23.19■■□□□ 1.3
VARS-218ENST00000459667 XKR9Q5GH70 373 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ODR4Q5SWX8 454 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 C4orf32Q8N8J7 132 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ZNF579Q8NAF0 562 aaKnown RBP23.19■■□□□ 1.3
VARS-218ENST00000459667 LINC01599Q8WXQ3 324 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 SLC7A3Q8WY07 619 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ZNF668Q96K58 619 aaPredicted RBP23.19■■□□□ 1.3
VARS-218ENST00000459667 SCLT1Q96NL6 688 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ADAMTS10Q9H324 1103 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ERVK-5Q9HDB9 667 aa23.19■■□□□ 1.3
VARS-218ENST00000459667 ENPP3O14638 875 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 ARHGEF15O94989 841 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 RFC5P40937 340 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 POLGP54098 1239 aaPredicted RBP23.18■■□□□ 1.3
VARS-218ENST00000459667 TAP1Q03518 808 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 PTGDRQ13258 359 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 EXOC8Q8IYI6 725 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 NLRP7Q8WX94 980 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 PRDM12Q9H4Q4 367 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.18■■□□□ 1.3
VARS-218ENST00000459667 INSL6Q9Y581 213 aa23.18■■□□□ 1.3
VARS-218ENST00000459667 ZBTB39O15060 712 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 GPR182O15218 404 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 FOSL2P15408 326 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 PDCP20941 246 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 HTRA4P83105 476 aaPredicted RBP23.17■■□□□ 1.3
VARS-218ENST00000459667 FAM228AQ86W67 206 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 ERMNQ8TAM6 284 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 INTS4Q96HW7 963 aaKnown RBP23.17■■□□□ 1.3
VARS-218ENST00000459667 TMX1Q9H3N1 280 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 DHX33Q9H6R0 707 aaKnown RBP23.17■■□□□ 1.3
VARS-218ENST00000459667 TUFT1Q9NNX1 390 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 BMP2KQ9NSY1 1161 aaPredicted RBP23.17■■□□□ 1.3
VARS-218ENST00000459667 SUCLA2Q9P2R7 463 aaPredicted RBP23.17■■□□□ 1.3
VARS-218ENST00000459667 ST3GAL5Q9UNP4 418 aa23.17■■□□□ 1.3
VARS-218ENST00000459667 VPS37CA5D8V6 355 aaPredicted RBP23.16■■□□□ 1.3
VARS-218ENST00000459667 LAD1O00515 517 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 FXR2P51116 673 aaKnown RBP eCLIP23.16■■□□□ 1.34e-13■■■■■ 29.3
VARS-218ENST00000459667 CDC42EP1Q00587 391 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 FAM43BQ6ZT52 329 aaPredicted RBP23.16■■□□□ 1.3
VARS-218ENST00000459667 RTN4RL1Q86UN2 441 aaPredicted RBP23.16■■□□□ 1.3
VARS-218ENST00000459667 HSCBQ8IWL3 235 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 SNX21Q969T3 373 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 CCDC43Q96MW1 224 aaKnown RBP23.16■■□□□ 1.3
VARS-218ENST00000459667 YME1L1Q96TA2 773 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 TSPYL2Q9H2G4 693 aaPredicted RBP23.16■■□□□ 1.3
VARS-218ENST00000459667 CERS4Q9HA82 394 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 ANKEF1Q9NU02 776 aa23.16■■□□□ 1.3
VARS-218ENST00000459667 CHD9Q3L8U1 2897 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 TTC3P53804 2025 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 MED24O75448 989 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 SPATA31C1P0DKV0 1188 aa23.15■■□□□ 1.3
VARS-218ENST00000459667 EIF4BP23588 611 aaKnown RBP23.15■■□□□ 1.3
VARS-218ENST00000459667 EMC2Q15006 297 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms