RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 KIZQ2M2Z5 673 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 TSGA10IPQ3SY00 556 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 FAM102BQ5T8I3 360 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 MCTP2Q6DN12 878 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-227ENST00000458564 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 SMAP1Q8IYB5 467 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-227ENST00000458564 THNSL1Q8IYQ7 743 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 PRSS33Q8NF86 280 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 PBXIP1Q96AQ6 731 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 NEK1Q96PY6 1258 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 OSMRQ99650 979 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 CWH43Q9H720 699 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 ATP6V0A4Q9HBG4 840 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-227ENST00000458564 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 TYW1Q9NV66 732 aaKnown RBP11.85□□□□□ -0.51
HDLBP-227ENST00000458564 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 BRPF3Q9ULD4 1205 aa11.85□□□□□ -0.51
HDLBP-227ENST00000458564 V9GY48 417 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-227ENST00000458564 CFAP54Q96N23 3096 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 DDX39AO00148 427 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 PER2O15055 1255 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 HOXA2O43364 376 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 SRGAP2BP0DMP2 458 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 FGFR1P11362 822 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 PPM1AP35813 382 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 ZNF76P36508 570 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 RBM10P98175 930 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 PFKFB3Q16875 520 aaPredicted RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 SPOUT1Q5T280 376 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 SWSAP1Q6NVH7 229 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 SUGP1Q8IWZ8 645 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 FBXL6Q8N531 539 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 LINC01465Q8N7H1 131 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 MICAL1Q8TDZ2 1067 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 S1PR5Q9H228 398 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 NGRNQ9NPE2 291 aaKnown RBP11.84□□□□□ -0.51
HDLBP-227ENST00000458564 HCSTQ9UBK5 93 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
HDLBP-227ENST00000458564 NID2Q14112 1375 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 GOLGA8AA7E2F4 631 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 GOLGA8BA8MQT2 603 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 MAGEB2O15479 319 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 HOXB8P17481 243 aaPredicted RBP11.83□□□□□ -0.52
HDLBP-227ENST00000458564 IER5LQ5T953 404 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 ANKRD54Q6NXT1 300 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 LRRC43Q8N309 656 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 ASIC4Q96FT7 647 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 FAM167AQ96KS9 214 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 CASD1Q96PB1 797 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 ZNF577Q9BSK1 485 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 RNF19AQ9NV58 838 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 PUF60Q9UHX1 559 aaKnown RBP11.83□□□□□ -0.52
HDLBP-227ENST00000458564 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
HDLBP-227ENST00000458564 KLF18A0A0U1RQI7 1052 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 VTNP04004 478 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 PSAPP07602 524 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 IBSPP21815 317 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-227ENST00000458564 EIF4BP23588 611 aaKnown RBP11.82□□□□□ -0.52
HDLBP-227ENST00000458564 CDC27P30260 824 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 CIITAP33076 1130 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 TCF15Q12870 199 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 KRT32Q14532 448 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 BMP2KLQ5H9B9 411 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 JAKMIP3Q5VZ66 844 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 PLPP4Q5VZY2 271 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 SYCE2Q6PIF2 218 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 KCNT2Q6UVM3 1135 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 LRRC55Q6ZSA7 311 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 REXO1Q8N1G1 1221 aaKnown RBP11.82□□□□□ -0.52
HDLBP-227ENST00000458564 METTL13Q8N6R0 699 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
HDLBP-227ENST00000458564 LENG9Q96B70 501 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 MAP7D2Q96T17 732 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 TCF25Q9BQ70 676 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 KMT2EQ8IZD2 1858 aa11.82□□□□□ -0.52
HDLBP-227ENST00000458564 EVPLQ92817 2033 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 CCDC196A0A1B0GTZ2 297 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 HIDE1A8MVS5 230 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
HDLBP-227ENST00000458564 TMOD1P28289 359 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 TECP42680 631 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 CLCN3P51790 818 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 NLRP11P59045 1033 aaKnown RBP11.81□□□□□ -0.52
HDLBP-227ENST00000458564 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 ADCK5Q3MIX3 580 aa11.81□□□□□ -0.52
HDLBP-227ENST00000458564 ECHDC2Q86YB7 292 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms