RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 C2CD2Q9Y426 696 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 CD2APQ9Y5K6 639 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 TLDC2A0PJX2 215 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 FAM163BP0C2L3 166 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 MFSD5Q6N075 450 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 ZNF571Q7Z3V5 609 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-214ENST00000457270 TRIM59Q8IWR1 403 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 LMNTD2Q8IXW0 634 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 TRIM7Q9C029 511 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 INTUQ9ULD6 942 aa15.29■□□□□ 0.04
TOP3B-214ENST00000457270 BAZ2BQ9UIF8 2168 aaKnown RBP15.28■□□□□ 0.04
TOP3B-214ENST00000457270 BAZ2AQ9UIF9 1905 aaKnown RBP15.28■□□□□ 0.04
TOP3B-214ENST00000457270 SPDYE5A6NIY4 337 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 IFNAR2P48551 515 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 DR1Q01658 176 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 SLC29A2Q14542 456 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 KCNV2Q8TDN2 545 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 NMT2O60551 498 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 ATP6V1C1P21283 382 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 GRB10Q13322 594 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 DHX34Q14147 1143 aaKnown RBP15.28■□□□□ 0.04
TOP3B-214ENST00000457270 PARP6Q2NL67 630 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 NUGGCQ68CJ6 796 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 DAAM2Q86T65 1068 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 CICQ96RK0 1608 aaPredicted RBP15.28■□□□□ 0.04
TOP3B-214ENST00000457270 RPTORQ8N122 1335 aa15.28■□□□□ 0.04
TOP3B-214ENST00000457270 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-214ENST00000457270 MYOCDQ8IZQ8 938 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 FITM2Q8N6M3 262 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 LARP4BQ92615 738 aaKnown RBP15.27■□□□□ 0.04
TOP3B-214ENST00000457270 TRIM31Q9BZY9 425 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 LRRC27Q9C0I9 530 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 RNPEPL1Q9HAU8 725 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 GOPCQ9HD26 462 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.27■□□□□ 0.04
TOP3B-214ENST00000457270 ECEL1O95672 775 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 CALB2P22676 271 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 TECP42680 631 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 BCAMP50895 628 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 CYB5RLQ6IPT4 315 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 ALKBH5Q6P6C2 394 aaKnown RBP15.27■□□□□ 0.04
TOP3B-214ENST00000457270 FBF1Q8TES7 1133 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 FGFR1OP2Q9NVK5 253 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 BARHL2Q9NY43 387 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 PNMA3Q9UL41 463 aa15.27■□□□□ 0.04
TOP3B-214ENST00000457270 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.03
TOP3B-214ENST00000457270 NHSL1Q5SYE7 1610 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 FGGP02679 453 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 ALDH3A1P30838 453 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 PRKCIP41743 596 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 CLUL1Q15846 466 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 TOM1L2Q6ZVM7 507 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 KRT25Q7Z3Z0 450 aa15.27■□□□□ 0.03
TOP3B-214ENST00000457270 APBB1IPQ7Z5R6 666 aaPredicted RBP15.27■□□□□ 0.03
TOP3B-214ENST00000457270 RBM12BQ8IXT5 1001 aaKnown RBP15.27■□□□□ 0.03
TOP3B-214ENST00000457270 NAP1L3Q99457 506 aaPredicted RBP15.27■□□□□ 0.03
TOP3B-214ENST00000457270 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 TCP11X1B4DZS4 312 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 TRAF5O00463 557 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 UNC5CO95185 931 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 AUHQ13825 339 aaKnown RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 RNF43Q68DV7 783 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 PNMA5Q96PV4 448 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 PLEKHG4BQ96PX9 1271 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ZNF330Q9Y3S2 320 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 CCNT1O60563 726 aaKnown RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 PCK1P35558 622 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 GNAQP50148 359 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 POLE2P56282 527 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 MKRN3Q13064 507 aaKnown RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ENOX2Q16206 610 aaKnown RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 DYMQ7RTS9 669 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 CNBD1Q8NA66 436 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ROPN1BQ9BZX4 212 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 ROPN1Q9HAT0 212 aaPredicted RBP15.26■□□□□ 0.03
TOP3B-214ENST00000457270 WDR35Q9P2L0 1181 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 CACNA1SQ13698 1873 aa15.26■□□□□ 0.03
TOP3B-214ENST00000457270 SNAP23O00161 211 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 RASGRF2O14827 1237 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 MAP3K13O43283 966 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 ACADSP16219 412 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 TPP2P29144 1249 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-214ENST00000457270 ACVR2BQ13705 512 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 FBXO25Q8TCJ0 367 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 NKX1-2Q9UD57 310 aaPredicted RBP15.25■□□□□ 0.03
TOP3B-214ENST00000457270 NR2E1Q9Y466 385 aa15.25■□□□□ 0.03
TOP3B-214ENST00000457270 LAMB1P07942 1786 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms