RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 TMEM161AQ9NX61 479 aa9.96□□□□□ -0.82
PKP4-207ENST00000457109 CYP46A1Q9Y6A2 500 aa9.96□□□□□ -0.82
PKP4-207ENST00000457109 RBAK-RBAKDNI3L0D1 243 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 MBTPS2O43462 519 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 CHMP2AO43633 222 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 FGF18O76093 207 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 IFNAR1P17181 557 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 EIF4BP23588 611 aaKnown RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 CIITAP33076 1130 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 ZP2Q05996 745 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 SMAD2Q15796 467 aaKnown RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 CTC1Q2NKJ3 1217 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 LRCH2Q5VUJ6 765 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 MIER3Q7Z3K6 550 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 FBXL16Q8N461 479 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 EFHBQ8N7U6 833 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 LINC01599Q8WXQ3 324 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 KCNB2Q92953 911 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 MFSD14AQ96MC6 490 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 CDCA3Q99618 268 aaPredicted RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 INO80BQ9C086 356 aaPredicted RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 SLKQ9H2G2 1235 aaPredicted RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 TMX1Q9H3N1 280 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 CDHR5Q9HBB8 845 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
PKP4-207ENST00000457109 TLR9Q9NR96 1032 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 DACT1Q9NYF0 836 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 VPS54Q9P1Q0 977 aa9.95□□□□□ -0.82
PKP4-207ENST00000457109 CARNS1A5YM72 827 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 DDX11L8A8MPP1 907 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 C9IYK1 514 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 EPB41L2O43491 1005 aaKnown RBP9.94□□□□□ -0.82
PKP4-207ENST00000457109 DKC1O60832 514 aaKnown RBP eCLIP9.94□□□□□ -0.821e-14■□□□□ 9.4
PKP4-207ENST00000457109 CDKL5O76039 1030 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 DEXIO95424 95 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 C22orf31O95567 290 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 OATP04181 439 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 ATP4AP20648 1035 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 PDIA3P30101 505 aaKnown RBP9.94□□□□□ -0.82
PKP4-207ENST00000457109 CA8P35219 290 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 PPM1AP35813 382 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 LTBRP36941 435 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 GATMP50440 423 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 CLCN3P51790 818 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 PKN1Q16512 942 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 FAM102BQ5T8I3 360 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 GALNT17Q6IS24 598 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 RUFY3Q7L099 469 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 EXOC8Q8IYI6 725 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 RDM1Q8NG50 284 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 RASGRP4Q8TDF6 673 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 CRYGNQ8WXF5 182 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 KHSRPQ92945 711 aaKnown RBP eCLIP9.94□□□□□ -0.826e-7■■■□□ 15.3
PKP4-207ENST00000457109 ZNF558Q96NG5 402 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 JPH2Q9BR39 696 aaPredicted RBP9.94□□□□□ -0.82
PKP4-207ENST00000457109 GCOM2Q9BZD3 368 aaPredicted RBP9.94□□□□□ -0.82
PKP4-207ENST00000457109 TMEM117Q9H0C3 514 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 ENTPD7Q9NQZ7 604 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 PCDHA4Q9UN74 947 aa9.94□□□□□ -0.82
PKP4-207ENST00000457109 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 MSH4O15457 936 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 LINC01565O15544 149 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 MGEA5O60502 916 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 GPR32O75388 356 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 EOMESO95936 686 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 NEFLP07196 543 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 LINC00271P0C7V0 271 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 FGFR1P11362 822 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 SKIP12755 728 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 GTF2F1P35269 517 aaKnown RBP eCLIP9.93□□□□□ -0.822e-13■■■□□ 16.7
PKP4-207ENST00000457109 ALDH7A1P49419 539 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 FAM189BP81408 668 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 PRKCEQ02156 737 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 DLX2Q07687 328 aaPredicted RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 XKR3Q5GH77 459 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 TMC7Q7Z402 723 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 FAM228AQ86W67 206 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 BLIDQ8IZY5 108 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 FAM177A1Q8N128 213 aaPredicted RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 CRIPAKQ8N1N5 446 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 LRRC71Q8N4P6 559 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 TBCKQ8TEA7 893 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 MRPS27Q92552 414 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 ZNF274Q96GC6 653 aaPredicted RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 NCOA5Q9HCD5 579 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 NGRNQ9NPE2 291 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 CHST12Q9NRB3 414 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 SPG21Q9NZD8 308 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 SEPT9Q9UHD8 586 aaPredicted RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 LZTS1Q9Y250 596 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 TRANK1O15050 2925 aa9.93□□□□□ -0.82
PKP4-207ENST00000457109 SPTBN5Q9NRC6 3674 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 TCF20Q9UGU0 1960 aaKnown RBP9.93□□□□□ -0.82
PKP4-207ENST00000457109 CCDC194A0A1B0GVG4 234 aa9.92□□□□□ -0.82
PKP4-207ENST00000457109 ZBTB42B2RXF5 422 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms