RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 LINC01599Q8WXQ3 324 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 HAS1Q92839 578 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 TTC3P53804 2025 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 TMEM150BA6NC51 233 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 NEMFO60524 1076 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 QARSP47897 775 aaKnown RBP18.21■□□□□ 0.51
CPSF6-203ENST00000456847 FBXO22Q8NEZ5 403 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 TMEM40Q8WWA1 233 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 C17orf80Q9BSJ5 609 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 ERVK-5Q9HDB9 667 aa18.21■□□□□ 0.51
CPSF6-203ENST00000456847 GPR182O15218 404 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 ATP2B1P20020 1258 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 NLRP11P59045 1033 aaKnown RBP18.2■□□□□ 0.5
CPSF6-203ENST00000456847 SAMD11Q96NU1 681 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 SH2D3AQ9BRG2 576 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 NIFKQ9BYG3 293 aaKnown RBP18.2■□□□□ 0.5
CPSF6-203ENST00000456847 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 ARID2Q68CP9 1835 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 CHD9Q3L8U1 2897 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 ADGRA3Q8IWK6 1321 aa18.2■□□□□ 0.5
CPSF6-203ENST00000456847 DENND3A2RUS2 1198 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 P4HBP07237 508 aaKnown RBP18.19■□□□□ 0.5
CPSF6-203ENST00000456847 EPHA7Q15375 998 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 SKIV2LQ15477 1246 aaKnown RBP18.19■□□□□ 0.5
CPSF6-203ENST00000456847 TARBP2Q15633 366 aaKnown RBP18.19■□□□□ 0.5
CPSF6-203ENST00000456847 PLA2G4FQ68DD2 849 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 FIBCD1Q8N539 461 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 LINC01465Q8N7H1 131 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
CPSF6-203ENST00000456847 TSPYL2Q9H2G4 693 aaPredicted RBP18.19■□□□□ 0.5
CPSF6-203ENST00000456847 LRFN2Q9ULH4 789 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 ST3GAL5Q9UNP4 418 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 GPR32O75388 356 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 STAG3L1P0CL83 205 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 NPAS4Q8IUM7 802 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 NLRP7Q8WX94 980 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 LXNQ9BS40 222 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 TMX1Q9H3N1 280 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 PRDM6Q9NQX0 595 aa18.19■□□□□ 0.5
CPSF6-203ENST00000456847 STBD1O95210 358 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 DNM2P50570 870 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 RTN4RL1Q86UN2 441 aaPredicted RBP18.18■□□□□ 0.5
CPSF6-203ENST00000456847 ZNF710Q8N1W2 664 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 DYDC2Q96IM9 177 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 PCDHA12Q9UN75 941 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 KIAA1671Q9BY89 1806 aa18.18■□□□□ 0.5
CPSF6-203ENST00000456847 WNT7AO00755 349 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 POU3F3P20264 500 aaPredicted RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 MCM7P33993 719 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 TXKP42681 527 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 GPC3P51654 580 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 CYP4A11Q02928 519 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 BTG3Q14201 252 aaPredicted RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 ANO5Q75V66 913 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 ADAM2Q99965 735 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 THEGQ9P2T0 379 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 MGEA5O60502 916 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 LPXNO60711 386 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 CTNNB1P35222 781 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 CTTNQ14247 550 aaKnown RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 EPC2Q52LR7 807 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 TMEM192Q8IY95 271 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 CEP170P1Q96L14 293 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 ADAMTS10Q9H324 1103 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 FOXP1Q9H334 677 aaPredicted RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 TTC12Q9H892 705 aaPredicted RBP18.17■□□□□ 0.5
CPSF6-203ENST00000456847 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 C1orf112Q9NSG2 853 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 RGL1Q9NZL6 768 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 KIF3AQ9Y496 699 aa18.17■□□□□ 0.5
CPSF6-203ENST00000456847 SARSP49591 514 aaKnown RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 POLGP54098 1239 aaPredicted RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 SPIRE1Q08AE8 756 aa18.16■□□□□ 0.5
CPSF6-203ENST00000456847 DRP2Q13474 957 aa18.16■□□□□ 0.5
CPSF6-203ENST00000456847 PAN2Q504Q3 1202 aaKnown RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 FAM43BQ6ZT52 329 aaPredicted RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 PRRC2BQ5JSZ5 2229 aaKnown RBP18.16■□□□□ 0.5
CPSF6-203ENST00000456847 DLL1O00548 723 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 MAFO75444 373 aaPredicted RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 DGKIO75912 1065 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 NPEPPSP55786 919 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 OTUD6AQ7L8S5 288 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 TPH2Q8IWU9 490 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 C4orf19Q8IY42 314 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 IL27Q8NEV9 243 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 SLC7A3Q8WY07 619 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 TBC1D32Q96NH3 1257 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 CEP89Q96ST8 783 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 EIF2AK1Q9BQI3 630 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 ZSWIM4Q9H7M6 989 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 NOL7Q9UMY1 257 aaKnown RBP18.15■□□□□ 0.5
CPSF6-203ENST00000456847 RWDD3Q9Y3V2 267 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 PCDHB7Q9Y5E2 793 aa18.15■□□□□ 0.5
CPSF6-203ENST00000456847 EIF4BP23588 611 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms