RNA–Protein interactions for RNA: ENST00000456079.1

PLOD3-207, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-207ENST00000456079 SPRED2Q7Z698 418 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 HSCBQ8IWL3 235 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 NME8Q8N427 588 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 TMX1Q9H3N1 280 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 XPNPEP1Q9NQW7 623 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 NOC2LQ9Y3T9 749 aaKnown RBP16.67■□□□□ 0.26
PLOD3-207ENST00000456079 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 KDM3AQ9Y4C1 1321 aa16.67■□□□□ 0.26
PLOD3-207ENST00000456079 PRUNE2Q8WUY3 3088 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 MAGEB2O15479 319 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 CSDE1O75534 798 aaKnown RBP16.66■□□□□ 0.26
PLOD3-207ENST00000456079 PARNO95453 639 aaKnown RBP16.66■□□□□ 0.26
PLOD3-207ENST00000456079 IER5Q5VY09 327 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 POTEGQ6S5H5 508 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 RSPH3Q86UC2 560 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 KSR1Q8IVT5 923 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 OSMRQ99650 979 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 IFIH1Q9BYX4 1025 aaKnown RBP16.66■□□□□ 0.26
PLOD3-207ENST00000456079 GINS2Q9Y248 185 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 CLIC4Q9Y696 253 aa16.66■□□□□ 0.26
PLOD3-207ENST00000456079 STX6O43752 255 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 MGEA5O60502 916 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 BAIAP3O94812 1187 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 ATP2A2P16615 1042 aaKnown RBP16.65■□□□□ 0.26
PLOD3-207ENST00000456079 DNAJB2P25686 324 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 NLRP11P59045 1033 aaKnown RBP16.65■□□□□ 0.26
PLOD3-207ENST00000456079 TBC1D8BQ0IIM8 1120 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 TSHZ1Q6ZSZ6 1077 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 TMEM143Q96AN5 459 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 FAM161BQ96MY7 647 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 POLR3CQ9BUI4 534 aaPredicted RBP16.65■□□□□ 0.26
PLOD3-207ENST00000456079 DHX33Q9H6R0 707 aaKnown RBP16.65■□□□□ 0.26
PLOD3-207ENST00000456079 PADI3Q9ULW8 664 aa16.65■□□□□ 0.26
PLOD3-207ENST00000456079 ABHD14A-ACY1A0A1B0GW23 586 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 LCHNA4D1U4 455 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 ACTN1P12814 892 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 PDCP20941 246 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 FGFR4P22455 802 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 RARRES1P49788 294 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 GPC3P51654 580 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 IKBKEQ14164 716 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 PTPAQ15257 358 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 SF3A1Q15459 793 aaKnown RBP16.64■□□□□ 0.25
PLOD3-207ENST00000456079 XKR9Q5GH70 373 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 FOXD4L5Q5VV16 416 aaPredicted RBP16.64■□□□□ 0.25
PLOD3-207ENST00000456079 KCNK18Q7Z418 384 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 BRAPQ7Z569 592 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 FAM228AQ86W67 206 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 LRRC15Q8TF66 581 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 FOXD4L4Q8WXT5 416 aaPredicted RBP16.64■□□□□ 0.25
PLOD3-207ENST00000456079 SEPT8Q92599 483 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 ERVK-5Q9HDB9 667 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 LRWD1Q9UFC0 647 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 AKT3Q9Y243 479 aa16.64■□□□□ 0.25
PLOD3-207ENST00000456079 SPTBN5Q9NRC6 3674 aaKnown RBP16.64■□□□□ 0.25
PLOD3-207ENST00000456079 GBF1Q92538 1859 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 LOXHD1Q8IVV2 1947 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 ENPP3O14638 875 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 RPA1P27694 616 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 PRPHP41219 470 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 CRYBB1P53674 252 aaPredicted RBP16.63■□□□□ 0.25
PLOD3-207ENST00000456079 PDIA5Q14554 519 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 FAM117BQ6P1L5 589 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 CRIPAKQ8N1N5 446 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 NEK9Q8TD19 979 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 SEMA6BQ9H3T3 888 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 POLD4Q9HCU8 107 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 TUFT1Q9NNX1 390 aa16.63■□□□□ 0.25
PLOD3-207ENST00000456079 SUCLA2Q9P2R7 463 aaPredicted RBP16.63■□□□□ 0.25
PLOD3-207ENST00000456079 MICAL3Q7RTP6 2002 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 A0A087WZ62 844 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 DTHD1Q6ZMT9 781 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 DEFB123Q8N688 67 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 PHOSPHO2Q8TCD6 241 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 PRPF31Q8WWY3 499 aaKnown RBP16.62■□□□□ 0.25
PLOD3-207ENST00000456079 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 PNMA5Q96PV4 448 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 FDXACB1Q9BRP7 624 aaPredicted RBP16.62■□□□□ 0.25
PLOD3-207ENST00000456079 ANKEF1Q9NU02 776 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 ST3GAL5Q9UNP4 418 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 ZDHHC9Q9Y397 364 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 SQORQ9Y6N5 450 aa16.62■□□□□ 0.25
PLOD3-207ENST00000456079 VWA3AA6NCI4 1184 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 LAD1O00515 517 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.25
PLOD3-207ENST00000456079 CCT6AP40227 531 aaKnown RBP16.61■□□□□ 0.25
PLOD3-207ENST00000456079 EMC2Q15006 297 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 OTUD6AQ7L8S5 288 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 MYOCDQ8IZQ8 938 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 ASAP3Q8TDY4 903 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 TIFAQ96CG3 184 aa16.61■□□□□ 0.25
PLOD3-207ENST00000456079 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms