RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 KLRC3Q07444 240 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 SLC29A2Q14542 456 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 BZW1Q7L1Q6 419 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 GPBP1Q86WP2 473 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 ARMC2Q8NEN0 867 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 RBM46Q8TBY0 533 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 DYDC1Q8WWB3 177 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 CARD9Q9H257 536 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 ECT2Q9H8V3 914 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 PARP2Q9UGN5 583 aa14.87□□□□□ -0.03
PTPRE-204ENST00000455661 DDX25Q9UHL0 483 aaKnown RBP14.87□□□□□ -0.03
PTPRE-204ENST00000455661 GFPT2O94808 682 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 UBOX5O94941 541 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 BAG3O95817 575 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 KLRK1P26718 216 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 CRKLP46109 303 aaKnown RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 IFNAR2P48551 515 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 TNNI2P48788 182 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 NAIF1Q69YI7 327 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 DPY19L2P1Q6NXN4 242 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 BTNL9Q6UXG8 535 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 SH3RF3Q8TEJ3 882 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 SPDL1Q96EA4 605 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 IFT74Q96LB3 600 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 CCDC113Q9H0I3 377 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 ABCF3Q9NUQ8 709 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 PCDHA12Q9UN75 941 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 COL4A1P02462 1669 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 KIF13BQ9NQT8 1826 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 E9PMD0 336 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 DDX3XO00571 662 aaKnown RBP eCLIP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 SNX3O60493 162 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 MAP2K1Q02750 393 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 DCAF17Q5H9S7 520 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 HYIQ5T013 277 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 JAMLQ86YT9 394 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 EYA3Q99504 573 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 UBA5Q9GZZ9 404 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 HOMER3Q9NSC5 361 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 KIAA1024Q9UPX6 916 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
PTPRE-204ENST00000455661 USP15Q9Y4E8 981 aaPredicted RBP14.86□□□□□ -0.03
PTPRE-204ENST00000455661 DDX3YO15523 660 aaKnown RBP14.85□□□□□ -0.03
PTPRE-204ENST00000455661 CALUO43852 315 aaPredicted RBP14.85□□□□□ -0.03
PTPRE-204ENST00000455661 SUN1O94901 812 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 RARAP10276 462 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 LMNB1P20700 586 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 STAT1P42224 750 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 NCALDP61601 193 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 KCNJ2P63252 427 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 GRIK3Q13003 919 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 TCERG1LQ5VWI1 586 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 ADAT2Q7Z6V5 191 aaKnown RBP14.85□□□□□ -0.03
PTPRE-204ENST00000455661 SLC35G2Q8TBE7 412 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 FBXO25Q8TCJ0 367 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 TGFBRAP1Q8WUH2 860 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
PTPRE-204ENST00000455661 RFFLQ8WZ73 363 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 COA7Q96BR5 231 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 KLHL29Q96CT2 875 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 PLCD4Q9BRC7 762 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 TMEM109Q9BVC6 243 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 MOV10L1Q9BXT6 1211 aaKnown RBP14.85□□□□□ -0.03
PTPRE-204ENST00000455661 KCNMB3Q9NPA1 279 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 JAG2Q9Y219 1238 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 MAST2Q6P0Q8 1798 aa14.85□□□□□ -0.03
PTPRE-204ENST00000455661 NPHP3-ACAD11A0A0J9YXS1 232 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 RASGRF2O14827 1237 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 KIAA0391O15091 583 aaKnown RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 DIAPH2O60879 1101 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 SKAP2O75563 359 aaPredicted RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 KRT13P13646 458 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 JAM2P57087 298 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 MAPK7Q13164 816 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 EPHA7Q15375 998 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 CNGA2Q16280 664 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 CEP120Q8N960 986 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 NEDD1Q8NHV4 660 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 CELF1Q92879 486 aaKnown RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 GLG1Q92896 1179 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 ANKRD2Q9GZV1 360 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 RIOX1Q9H6W3 641 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 METTL14Q9HCE5 456 aaKnown RBP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 OSGEPQ9NPF4 335 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 TRAF3IP3Q9Y228 551 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 CD2APQ9Y5K6 639 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 IGF2BP3O00425 579 aaKnown RBP eCLIP14.84□□□□□ -0.03
PTPRE-204ENST00000455661 PODXLO00592 558 aa14.84□□□□□ -0.03
PTPRE-204ENST00000455661 EDIL3O43854 480 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms