RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 ACSS3Q9H6R3 686 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 FAM86C1Q9NVL1 165 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 AFG3L2Q9Y4W6 797 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 LRRFIP2Q9Y608 721 aaKnown RBP8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 MROH5Q6ZUA9 1318 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 MYH3P11055 1940 aa8.23□□□□□ -1.09
LSMEM1-203ENST00000455302 COL2A1P02458 1487 aaPredicted RBP8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 TMEM265A0A087WTH1 108 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 A0A1W2PQU0 124 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 C9IYK1 514 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 C9orf172C9J069 976 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 SPATA31C1P0DKV0 1188 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 COL6A1P12109 1028 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 CYP2B6P20813 491 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 MAP7Q14244 749 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 TWISTNBQ3B726 338 aaPredicted RBP8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 METTL24Q5JXM2 366 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 AXDND1Q5T1B0 1012 aaPredicted RBP8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 TREML2Q5T2D2 321 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 POMZP3Q6PJE2 187 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 LRRN4CLQ8ND94 238 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 TRIB2Q92519 343 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 DHRS4Q9BTZ2 278 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 WHRNQ9P202 907 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 DAGLAQ9Y4D2 1042 aa8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 MYBBP1AQ9BQG0 1328 aaKnown RBP8.22□□□□□ -1.09
LSMEM1-203ENST00000455302 RFPL3O75679 317 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 ZKSCAN1P17029 563 aaPredicted RBP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 CYP7A1P22680 504 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 GCLCP48506 637 aaPredicted RBP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 MASP1P48740 699 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 PABPC4Q13310 644 aaKnown RBP eCLIP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 LETMD1Q6P1Q0 360 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 UBE3DQ7Z6J8 389 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 ZFPM1Q8IX07 1006 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 KREMEN1Q96MU8 473 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 AARSD1Q9BTE6 412 aaKnown RBP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 ASPNQ9BXN1 380 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 KLHL25Q9H0H3 589 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 C9orf78Q9NZ63 289 aaPredicted RBP8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 SUSD2Q9UGT4 822 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 GJD2Q9UKL4 321 aa8.21□□□□□ -1.1
LSMEM1-203ENST00000455302 TTC28Q96AY4 2481 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 GRM8O00222 908 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 CTNND1O60716 968 aaKnown RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 ITGA4P13612 1032 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 GLB1P16278 677 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 RAB6AP20340 208 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 CD247P20963 164 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 AUHQ13825 339 aaKnown RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 UVSSAQ2YD98 709 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 BEND3Q5T5X7 828 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 MAP3K21Q5TCX8 1036 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 BVESQ8NE79 360 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 WDR66Q8TBY9 1149 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 PPP1R13LQ8WUF5 828 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 SOCS4Q8WXH5 440 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 NINJ1Q92982 152 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 RCC1LQ96I51 464 aaKnown RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 MIPEPQ99797 713 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 SENP6Q9GZR1 1112 aaPredicted RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 TTYH1Q9H313 450 aaPredicted RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 ALPK3Q96L96 1907 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 MUC3AQ02505 3323 aa8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 DDX60LQ5H9U9 1706 aaKnown RBP8.2□□□□□ -1.1
LSMEM1-203ENST00000455302 DNAJC25-GNG10A0A024R161 153 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 TRBV23-1A0A0A0MS06 115 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 PLD2O14939 933 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 CBFA2T2O43439 604 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 IFIT1P09914 478 aaKnown RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 CCND3P30281 292 aaPredicted RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 PREPP48147 710 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 RGS3P49796 1198 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 PPP2R2AP63151 447 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 SMAD3P84022 425 aaKnown RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 CACNB2Q08289 660 aaPredicted RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 SHHQ15465 462 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 GRIK4Q16099 956 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 FNDC3BQ53EP0 1204 aaKnown RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 SHISA2Q6UWI4 295 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 Q6ZS46 218 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 CCAR1Q8IX12 1150 aaKnown RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 DNAJB8Q8NHS0 232 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 RNF141Q8WVD5 230 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 COX4I2Q96KJ9 171 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 ZNF512BQ96KM6 892 aaPredicted RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 FGD4Q96M96 766 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 FBXL18Q96ME1 805 aa8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 ASCC2Q9H1I8 757 aaPredicted RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
LSMEM1-203ENST00000455302 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms