RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TECP42680 631 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 NPEPPSP55786 919 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 DEFB103AP81534 67 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 DRP2Q13474 957 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ARL6IP4Q66PJ3 421 aaKnown RBP15.85■□□□□ 0.13
HDAC4-205ENST00000454542 HAUS3Q68CZ6 603 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 FAM43BQ6ZT52 329 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-205ENST00000454542 FERMT3Q86UX7 667 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 CATSPER3Q86XQ3 398 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ZNF579Q8NAF0 562 aaKnown RBP15.85■□□□□ 0.13
HDAC4-205ENST00000454542 TMEM40Q8WWA1 233 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 JPH2Q9BR39 696 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-205ENST00000454542 SH2D3AQ9BRG2 576 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 ANKEF1Q9NU02 776 aa15.85■□□□□ 0.13
HDAC4-205ENST00000454542 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-205ENST00000454542 GRXCR1A8MXD5 290 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 ZBTB39O15060 712 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 GAS2O43903 313 aaKnown RBP15.84■□□□□ 0.13
HDAC4-205ENST00000454542 BMP15O95972 392 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 VTNP04004 478 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 TMOD1P28289 359 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 RFC5P40937 340 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 RARRES1P49788 294 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 GPC3P51654 580 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 CRYBB1P53674 252 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-205ENST00000454542 IKBKEQ14164 716 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 PDIA5Q14554 519 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 TPH2Q8IWU9 490 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 METTL13Q8N6R0 699 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 ERMNQ8TAM6 284 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 LINC01599Q8WXQ3 324 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 CEP170P1Q96L14 293 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 CDHR5Q9HBB8 845 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 ERVK-5Q9HDB9 667 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 XPNPEP1Q9NQW7 623 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 FOXD4L1Q9NU39 408 aa15.84■□□□□ 0.13
HDAC4-205ENST00000454542 MORC2Q9Y6X9 1032 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-205ENST00000454542 XRCC6P12956 609 aaKnown RBP eCLIP15.83■□□□□ 0.12
HDAC4-205ENST00000454542 CD52P31358 61 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 PBX2P40425 430 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 KCNJ6P48051 423 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 RAB30Q15771 203 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 KIZQ2M2Z5 673 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 OTUD6AQ7L8S5 288 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 FAM228AQ86W67 206 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 HERC6Q8IVU3 1022 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 EXOC8Q8IYI6 725 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 OSMRQ99650 979 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 RAB34Q9BZG1 259 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
HDAC4-205ENST00000454542 AKT3Q9Y243 479 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 YBX2Q9Y2T7 364 aaKnown RBP15.83■□□□□ 0.12
HDAC4-205ENST00000454542 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 STK24Q9Y6E0 443 aa15.83■□□□□ 0.12
HDAC4-205ENST00000454542 TTC3P53804 2025 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 GJB5O95377 273 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 PAK2Q13177 524 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 EMC2Q15006 297 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 PTPAQ15257 358 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 ECM1Q16610 540 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 XKR9Q5GH70 373 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 HYIQ5T013 277 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 POTEGQ6S5H5 508 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 DTHD1Q6ZMT9 781 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDAC4-205ENST00000454542 ZNF410Q86VK4 478 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 SLC7A3Q8WY07 619 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 MMTAG2Q9BU76 263 aaKnown RBP15.82■□□□□ 0.12
HDAC4-205ENST00000454542 TTYH1Q9H313 450 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-205ENST00000454542 TMX1Q9H3N1 280 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-205ENST00000454542 LRWD1Q9UFC0 647 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 PADI3Q9ULW8 664 aa15.82■□□□□ 0.12
HDAC4-205ENST00000454542 NOC2LQ9Y3T9 749 aaKnown RBP15.82■□□□□ 0.12
HDAC4-205ENST00000454542 DGAT1O75907 488 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 PDIA4P13667 645 aaKnown RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 DARSP14868 501 aaKnown RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 POLGP54098 1239 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 NLRP11P59045 1033 aaKnown RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 SF3A1Q15459 793 aaKnown RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 PIGOQ8TEQ8 1089 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 TIFAQ96CG3 184 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 PPP1R16BQ96T49 567 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 FTHL17Q9BXU8 183 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 TSPYL2Q9H2G4 693 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 SUGCTQ9HAC7 445 aa15.81■□□□□ 0.12
HDAC4-205ENST00000454542 RC3H2Q9HBD1 1191 aaKnown RBP15.81■□□□□ 0.12
HDAC4-205ENST00000454542 COL4A4P53420 1690 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-205ENST00000454542 CHD7Q9P2D1 2997 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 PP2D1A8MPX8 630 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 SLC34A2O95436 690 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 AMHP03971 560 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 RABGGTBP53611 331 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 HTRA4P83105 476 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-205ENST00000454542 CDC42EP1Q00587 391 aa15.8■□□□□ 0.12
HDAC4-205ENST00000454542 ZNF697Q5TEC3 545 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms