RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 FAM83BQ5T0W9 1011 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 RNF43Q68DV7 783 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 NCSTNQ92542 709 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 GLG1Q92896 1179 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 ETNK2Q9NVF9 386 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 SNX24Q9Y343 169 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
PTPA-223ENST00000452489 POLR2FP61218 127 aaKnown RBP20.16■□□□□ 0.82
PTPA-223ENST00000452489 ASIC1P78348 528 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 FUT2Q10981 343 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 ZNF449Q6P9G9 518 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 INTS8Q75QN2 995 aaKnown RBP20.16■□□□□ 0.82
PTPA-223ENST00000452489 TAOK1Q7L7X3 1001 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 C4orf32Q8N8J7 132 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 KIAA0895Q8NCT3 520 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 CNNM2Q9H8M5 875 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 INTUQ9ULD6 942 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 USP20Q9Y2K6 914 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 RTCBQ9Y3I0 505 aaKnown RBP20.16■□□□□ 0.82
PTPA-223ENST00000452489 USH1CQ9Y6N9 552 aa20.16■□□□□ 0.82
PTPA-223ENST00000452489 RASGRF2O14827 1237 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 NOL4O94818 638 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 CCDC6Q16204 474 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 CERKLQ49MI3 558 aaPredicted RBP20.15■□□□□ 0.82
PTPA-223ENST00000452489 CCDC152Q4G0S7 254 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 TNFAIP8L3Q5GJ75 292 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 ZDHHC24Q6UX98 284 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 CCDC85AQ96PX6 553 aaPredicted RBP20.15■□□□□ 0.82
PTPA-223ENST00000452489 TGS1Q96RS0 853 aaKnown RBP20.15■□□□□ 0.82
PTPA-223ENST00000452489 CIAO1O76071 339 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 RAPGEF1Q13905 1077 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 WASHC2DQ5SRD0 308 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 DUPD1Q68J44 220 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 RFWD3Q6PCD5 774 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 VSTM1Q6UX27 236 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 BARGINQ6ZT62 677 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 CEP128Q6ZU80 1094 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 FAM133AQ8N9E0 248 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 SLC7A6OSQ96CW6 309 aaPredicted RBP20.15■□□□□ 0.82
PTPA-223ENST00000452489 DCLRE1BQ9H816 532 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 STOML1Q9UBI4 398 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 MYH4Q9Y623 1939 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 MROH7Q68CQ1 1323 aa20.15■□□□□ 0.82
PTPA-223ENST00000452489 PALM3A6NDB9 673 aaPredicted RBP20.14■□□□□ 0.82
PTPA-223ENST00000452489 CD151P48509 253 aa20.14■□□□□ 0.82
PTPA-223ENST00000452489 KCNK9Q9NPC2 374 aa20.14■□□□□ 0.82
PTPA-223ENST00000452489 PDP2Q9P2J9 529 aa20.14■□□□□ 0.82
PTPA-223ENST00000452489 RBM47A0AV96 593 aaKnown RBP20.14■□□□□ 0.81
PTPA-223ENST00000452489 ZNF189O75820 626 aaPredicted RBP20.14■□□□□ 0.81
PTPA-223ENST00000452489 FGGP02679 453 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 PDE6AP16499 860 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 CCDC15Q0P6D6 951 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 LSAMPQ13449 338 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 RASGEF1CQ8N431 466 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 CKAP2Q8WWK9 683 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 ERP44Q9BS26 406 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 CUEDC2Q9H467 287 aa20.14■□□□□ 0.81
PTPA-223ENST00000452489 SEC63Q9UGP8 760 aaKnown RBP20.14■□□□□ 0.81
PTPA-223ENST00000452489 PRPF3O43395 683 aaKnown RBP20.13■□□□□ 0.81
PTPA-223ENST00000452489 MBD4O95243 580 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 UBA7P41226 1012 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 DR1Q01658 176 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 MPP2Q14168 576 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 SEPT14Q6ZU15 432 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 PEX26Q7Z412 305 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 IP6K1Q92551 441 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 CCDC97Q96F63 343 aaPredicted RBP20.13■□□□□ 0.81
PTPA-223ENST00000452489 TRIM9Q9C026 710 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 ATRNO75882 1429 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 PNPLA7Q6ZV29 1317 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 TMEM94Q12767 1356 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 PRKAB2O43741 272 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 EIF4BP23588 611 aaKnown RBP20.13■□□□□ 0.81
PTPA-223ENST00000452489 KLHL30Q0D2K2 578 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 RCN1Q15293 331 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 LONRF1Q17RB8 773 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 ZNF365Q70YC5 407 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
PTPA-223ENST00000452489 CEP72Q9P209 647 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 CHKBQ9Y259 395 aa20.13■□□□□ 0.81
PTPA-223ENST00000452489 CBX6O95503 412 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 T-ENOLP0DO92 83 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 VEGFAP15692 232 aaPredicted RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 ARL6IP4Q66PJ3 421 aaKnown RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 ANKLE2Q86XL3 938 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 ARHGEF2Q92974 986 aaKnown RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 IWS1Q96ST2 819 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 LSM14BQ9BX40 385 aaKnown RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 DAAM1Q9Y4D1 1078 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 LMTK3Q96Q04 1460 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 NPHP3-ACAD11A0A0J9YXS1 232 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 RPL13P26373 211 aaKnown RBP20.12■□□□□ 0.81
PTPA-223ENST00000452489 RTP1P59025 263 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 OCRLQ01968 901 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 GIT2Q14161 759 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 UBE3CQ15386 1083 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 HAPLN3Q96S86 360 aa20.12■□□□□ 0.81
PTPA-223ENST00000452489 NAP1L3Q99457 506 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms