RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 PCDHGA12O60330 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 DKC1O60832 514 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLITRK5O94991 958 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 DNTTP04053 509 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 ITGAVP06756 1048 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 FAM87AP0C7U9 286 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 MUTP22033 750 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 TNFSF4P23510 183 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 POLR2BP30876 1174 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 HPDP32754 393 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 NPTX2P47972 431 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 LSSP48449 732 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PRIM2P49643 509 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF132P52740 706 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 MAPK10P53779 464 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PMS1P54277 932 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 TMF1P82094 1093 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 OCRLQ01968 901 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PTPN11Q06124 597 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 RING1Q06587 406 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 WIPI1Q5MNZ9 446 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZBTB37Q5TC79 503 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 NUGGCQ68CJ6 796 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 INTS3Q68E01 1043 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 OVOS1Q6IE37 1185 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 LRFN4Q6PJG9 635 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 OGFOD3Q6PK18 319 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 SYDE1Q6ZW31 735 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 BTN2A1Q7KYR7 527 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 RTL10Q7L3V2 364 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 RASGRP2Q7LDG7 609 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 CATSPER4Q7RTX7 472 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 DDX53Q86TM3 631 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 ARHGEF25Q86VW2 580 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 C12orf40Q86WS4 652 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 IQCA1Q86XH1 822 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 KIF18BQ86Y91 864 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 CEP57L1Q8IYX8 460 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 NRSN1Q8IZ57 195 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 CAMKK1Q8N5S9 505 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 OR8H1Q8NGG4 311 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 UCMAQ8WVF2 138 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 CENPIQ92674 756 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 DIO2Q92813 273 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PLPPR2Q96GM1 343 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 RADILQ96JH8 1075 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 NT5C1BQ96P26 610 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PPP1R16BQ96T49 567 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 MPHOSPH8Q99549 860 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 TTLL2Q9BWV7 592 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 LRRC4CQ9HCJ2 640 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 EMC7Q9NPA0 242 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 NSMCE4AQ9NXX6 385 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 SAMD15Q9P1V8 674 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 CFDP1Q9UEE9 299 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 MAGED2Q9UNF1 606 aaPredicted RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZKSCAN5Q9Y2L8 839 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 RRP7AQ9Y3A4 280 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA9Q9Y5G4 932 aaKnown RBP5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA8Q9Y5G5 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA7Q9Y5G6 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA6Q9Y5G7 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA3Q9Y5H0 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 PCDHGA2Q9Y5H1 932 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 IKBKGQ9Y6K9 419 aa5.06□□□□□ -1.6
HMGB3P21-201ENST00000452483 GPRASP1Q5JY77 1395 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ANKRD34BA5PLL1 514 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 A6NLC8 198 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 FANCGO15287 622 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 HTATSF1O43719 755 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 AHCYL1O43865 530 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZBED4O75132 1171 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ADAMTS4O75173 837 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 HTR3BO95264 441 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 CSTBP04080 98 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 APOA4P06727 396 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 AKR1B1P15121 316 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ATP6V1B1P15313 513 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 NME1P15531 152 aaKnown RBP5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 RAG1P15918 1043 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 XBP1P17861 261 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 CNTFP26441 200 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 PEX2P28328 305 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 CASQ1P31415 396 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 TECP42680 631 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 SESN3P58005 492 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 INPP5AQ14642 412 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 E2F5Q15329 346 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 SLC14A2Q15849 920 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 PARP10Q53GL7 1025 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ANKRD45Q5TZF3 282 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 PGBD2Q6P3X8 592 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 NEK10Q6ZWH5 1172 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 NLRC3Q7RTR2 1065 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 OVCH2Q7RTZ1 564 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 UBE3DQ7Z6J8 389 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 ZNF227Q86WZ6 799 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 GALNT13Q8IUC8 556 aa5.05□□□□□ -1.6
HMGB3P21-201ENST00000452483 EGFL6Q8IUX8 553 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms