RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 TIGD5Q53EQ6 642 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 BANK1Q8NDB2 785 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 CLP1Q92989 425 aaKnown RBP14.52□□□□□ -0.08
CHD3-206ENST00000452447 TMX1Q9H3N1 280 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 ERVK-5Q9HDB9 667 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 ORC3Q9UBD5 711 aaPredicted RBP14.52□□□□□ -0.08
CHD3-206ENST00000452447 PCDHB7Q9Y5E2 793 aa14.52□□□□□ -0.08
CHD3-206ENST00000452447 C5orf67F2Z3F1 127 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 TBC1D8BQ0IIM8 1120 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 UGCGQ16739 394 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 NEK8Q86SG6 692 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 CMTR2Q8IYT2 770 aaKnown RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 ZNF710Q8N1W2 664 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 MBOAT7Q96N66 472 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 ADAM2Q99965 735 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 UBE2ZQ9H832 354 aaPredicted RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 C1orf112Q9NSG2 853 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 GPR32O75388 356 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 SARSP49591 514 aaKnown RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 NLRP11P59045 1033 aaKnown RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 PAN2Q504Q3 1202 aaKnown RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 SLC24A5Q71RS6 500 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 CRIPAKQ8N1N5 446 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 LRRC71Q8N4P6 559 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 ETNPPLQ8TBG4 499 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 PLVAPQ9BX97 442 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 BRMS1Q9HCU9 246 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 RGS18Q9NS28 235 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 GJB4Q9NTQ9 266 aa14.51□□□□□ -0.09
CHD3-206ENST00000452447 SEPT9Q9UHD8 586 aaPredicted RBP14.51□□□□□ -0.09
CHD3-206ENST00000452447 MARCH6O60337 910 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 CCNT1O60563 726 aaKnown RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 DTNBO60941 627 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 CTDNEP1O95476 244 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 LINC00271P0C7V0 271 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 GCFC2P16383 781 aaKnown RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 KCNA5P22460 613 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 NEK4P51957 841 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 ME3Q16798 604 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 PPP4R3AQ6IN85 833 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 PIK3AP1Q6ZUJ8 805 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 FAM228AQ86W67 206 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 NECAB1Q8N987 351 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 NECAB3Q96P71 396 aaPredicted RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 NAP1L4Q99733 375 aaKnown RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 LMAN2LQ9H0V9 348 aa14.5□□□□□ -0.09
CHD3-206ENST00000452447 NSUN3Q9H649 340 aaKnown RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 MRPL42Q9Y6G3 142 aaKnown RBP14.5□□□□□ -0.09
CHD3-206ENST00000452447 FNDC1Q4ZHG4 1894 aaPredicted RBP14.49□□□□□ -0.09
CHD3-206ENST00000452447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.49□□□□□ -0.09
CHD3-206ENST00000452447 GRM6O15303 877 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 SLC37A4O43826 429 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 MGEA5O60502 916 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 ZSCAN20P17040 1043 aaPredicted RBP14.49□□□□□ -0.09
CHD3-206ENST00000452447 MTERF2Q49AM1 385 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 B3GNT9Q6UX72 402 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 EP400NLQ6ZTU2 488 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 LINC01465Q8N7H1 131 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 OXER1Q8TDS5 423 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 GTF3C6Q969F1 213 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 FAM20AQ96MK3 541 aa14.49□□□□□ -0.09
CHD3-206ENST00000452447 KIAA1671Q9BY89 1806 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 EIF4BP23588 611 aaKnown RBP14.48□□□□□ -0.09
CHD3-206ENST00000452447 KRT2P35908 639 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 GATMP50440 423 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 DNM2P50570 870 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 CDC42EP1Q00587 391 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 NAALADL2Q58DX5 795 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 TCEAL5Q5H9L2 206 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 SPOUT1Q5T280 376 aaKnown RBP14.48□□□□□ -0.09
CHD3-206ENST00000452447 NLRP7Q8WX94 980 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 P2RX5Q93086 422 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 NIFKQ9BYG3 293 aaKnown RBP14.48□□□□□ -0.09
CHD3-206ENST00000452447 ADAMTS10Q9H324 1103 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 ALG13Q9NP73 1137 aaKnown RBP14.48□□□□□ -0.09
CHD3-206ENST00000452447 KCNMB3Q9NPA1 279 aa14.48□□□□□ -0.09
CHD3-206ENST00000452447 DDX11L8A8MPP1 907 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 C9IYK1 514 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 NCK2O43639 380 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 DKC1O60832 514 aaKnown RBP eCLIP14.47□□□□□ -0.09
CHD3-206ENST00000452447 CSPG5O95196 566 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 PSMC5P62195 406 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 PPP2R5CQ13362 524 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TARBP2Q15633 366 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 ZNF668Q96K58 619 aaPredicted RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 SH2D3AQ9BRG2 576 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 ATP6V0A4Q9HBG4 840 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 PLAGL2Q9UPG8 496 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 ATG2AQ2TAZ0 1938 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TMEM150BA6NC51 233 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TBKBP1A7MCY6 615 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 TBX3O15119 743 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 BAG4O95429 457 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 LARGE1O95461 756 aa14.47□□□□□ -0.09
CHD3-206ENST00000452447 FDPSP14324 419 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 QARSP47897 775 aaKnown RBP14.47□□□□□ -0.09
CHD3-206ENST00000452447 GPC3P51654 580 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms