RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TMC5Q6UXY8 1006 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CATIPQ7Z7H3 387 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRMT44Q8IYL2 757 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 NECAB1Q8N987 351 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KCNV2Q8TDN2 545 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 SCG3Q8WXD2 468 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 APBB2Q92870 758 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DGCR14Q96DF8 476 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 OMA1Q96E52 524 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MAGEB18Q96M61 343 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RILPQ96NA2 401 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRIM56Q9BRZ2 755 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 DESI2Q9BSY9 194 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 FUCA2Q9BTY2 467 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 WDR12Q9GZL7 423 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 WWP1Q9H0M0 922 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ISCUQ9H1K1 167 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CCSER2Q9H7U1 834 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RNPEPL1Q9HAU8 725 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZCCHC17Q9NP64 241 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 C8orf4Q9NR00 106 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ABHD10Q9NUJ1 306 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PCSK1NQ9UHG2 260 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 FADS3Q9Y5Q0 445 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 WDR19Q8NEZ3 1342 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ARPC4-TTLL3A0A0A6YYG9 625 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MIF4GDA9UHW6 222 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 F8VZ95 297 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 LAD1O00515 517 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 APOL1O14791 398 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PFDN6O15212 129 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PRPF3O43395 683 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 KCNQ3O43525 872 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MGRN1O60291 552 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRPA1O75762 1119 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RASSF9O75901 435 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DEXIO95424 95 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CLPTM1O96005 669 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SERPING1P05155 500 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GSPT1P15170 499 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 CDH3P22223 829 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 JAK1P23458 1154 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GARSP41250 739 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 NT5C2P49902 561 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 C21orf59P57076 290 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GUCY1A3Q02108 690 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KLHL38Q2WGJ6 581 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GRAMD1BQ3KR37 738 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ARMC3Q5W041 872 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TRAF7Q6Q0C0 670 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 RGS9BPQ6ZS82 235 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ACAD11Q709F0 780 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 PCGF5Q86SE9 256 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ANKRD13BQ86YJ7 626 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 NUDCD3Q8IVD9 361 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SIX6OS1Q8N1H7 587 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TTC39CQ8N584 583 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 CNBD1Q8NA66 436 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZNF579Q8NAF0 562 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 RIN3Q8TB24 985 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZNF398Q8TD17 642 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZNF184Q99676 751 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 MTA3Q9BTC8 594 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DSCC1Q9BVC3 393 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 TIPINQ9BVW5 301 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 OSBPL8Q9BZF1 889 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KLHL25Q9H0H3 589 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 EHD1Q9H4M9 534 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 EBF2Q9HAK2 575 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 HMG20AQ9NP66 347 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DDX28Q9NUL7 540 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 NLRP2Q9NX02 1062 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 GALNT8Q9NY28 637 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KIF17Q9P2E2 1029 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ANKFY1Q9P2R3 1169 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ASIC3Q9UHC3 531 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 DDX20Q9UHI6 824 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 EXOC6BQ9Y2D4 811 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 EFR3BQ9Y2G0 817 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 IPPQ9Y573 584 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MROH7-TTC4A0A0A0MT08 1334 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 WDR17Q8IZU2 1322 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ZFYVE16Q7Z3T8 1539 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SPATA31D1Q6ZQQ2 1576 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 INO80Q9ULG1 1556 aaPredicted RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 KLF18A0A0U1RQI7 1052 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 A0A1W2PQJ5 194 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ANKRD33BA6NCL7 494 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 AXIN1O15169 862 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 N4BP1O75113 896 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 RHOBTB1O94844 696 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ECEL1O95672 775 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 SERPINB2P05120 415 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 S100A9P06702 114 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 CAPN1P07384 714 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 KRT16P08779 473 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 ACTN1P12814 892 aa2.36□□□□□ -2.03
USP53-202ENST00000450251 MAP4P27816 1152 aaKnown RBP2.36□□□□□ -2.03
USP53-202ENST00000450251 PTPN4P29074 926 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms