RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CYP26B1Q9NR63 512 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 SEPT9Q9UHD8 586 aaPredicted RBP15.71■□□□□ 0.11
USP39-207ENST00000450066 TLL2Q9Y6L7 1015 aa15.71■□□□□ 0.11
USP39-207ENST00000450066 PES1O00541 588 aaKnown RBP15.71■□□□□ 0.1
USP39-207ENST00000450066 OATP04181 439 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 ATP4AP20648 1035 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 NR2F2P24468 414 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 RPL13P26373 211 aaKnown RBP15.71■□□□□ 0.1
USP39-207ENST00000450066 TTLL4Q14679 1199 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 MAN2A1Q16706 1144 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 VWA3BQ502W6 1294 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 FAM160B1Q5W0V3 765 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 TC2NQ8N9U0 490 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 CCDC112Q8NEF3 446 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 MCPH1Q8NEM0 835 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 KIFAP3Q92845 792 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 ST6GALNAC4Q9H4F1 302 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 VTA1Q9NP79 307 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 PDLIM7Q9NR12 457 aa15.71■□□□□ 0.1
USP39-207ENST00000450066 MYH11P35749 1972 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 ZMYM2Q9UBW7 1377 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 PLXNA1Q9UIW2 1896 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 TGFB1I1O43294 461 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
USP39-207ENST00000450066 TRIM14Q14142 442 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 TAF1CQ15572 869 aaPredicted RBP15.7■□□□□ 0.1
USP39-207ENST00000450066 NFIL3Q16649 462 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 FAM102BQ5T8I3 360 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 MAMDC4Q6UXC1 1216 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 DPP9Q86TI2 863 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 CCDC102AQ96A19 550 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 PCYT2Q99447 389 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 GPR20Q99678 358 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 NIFKQ9BYG3 293 aaKnown RBP15.7■□□□□ 0.1
USP39-207ENST00000450066 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 C17orf75Q9HAS0 396 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 CPA4Q9UI42 421 aa15.7■□□□□ 0.1
USP39-207ENST00000450066 SLC15A5A6NIM6 579 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 AKR1B15C9JRZ8 316 aaPredicted RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 K7ENM7 598 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP39-207ENST00000450066 TCF7P36402 384 aaPredicted RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 STAT5BP51692 787 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 RBL2Q08999 1139 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 CCDC40Q4G0X9 1142 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 DHX37Q8IY37 1157 aaKnown RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 NDST4Q9H3R1 872 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 PDGFCQ9NRA1 345 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 MCM3APO60318 1980 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 FAM155AB1AL88 458 aaPredicted RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 NOP56O00567 594 aaKnown RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 NR3C1P04150 777 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 GYPCP04921 128 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 TPM1P09493 284 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 ADKP55263 362 aaKnown RBP15.69■□□□□ 0.1
USP39-207ENST00000450066 RTP1P59025 263 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 NOLC1Q14978 699 aaKnown RBP eCLIP15.69■□□□□ 0.1
USP39-207ENST00000450066 HSDL1Q3SXM5 330 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 FKBP15Q5T1M5 1219 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 CEP135Q66GS9 1140 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 TAPT1Q6NXT6 567 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 GOLGA5Q8TBA6 731 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 GBP3Q9H0R5 595 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 AZI2Q9H6S1 392 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 ATP6V0A4Q9HBG4 840 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 SPTLC3Q9NUV7 552 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 ARID2Q68CP9 1835 aa15.69■□□□□ 0.1
USP39-207ENST00000450066 RBM47A0AV96 593 aaKnown RBP15.68■□□□□ 0.1
USP39-207ENST00000450066 LGR5O75473 907 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 SMTNP53814 917 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 NCKAP1LP55160 1127 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 GTF2BQ00403 316 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 HS2ST1Q7LGA3 356 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 CNGA4Q8IV77 575 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 TRIM59Q8IWR1 403 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 MAML3Q96JK9 1138 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 SPATA33Q96N06 139 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 PANX2Q96RD6 677 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 ERGIC2Q96RQ1 377 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 NTPCRQ9BSD7 190 aaKnown RBP15.68■□□□□ 0.1
USP39-207ENST00000450066 TMEM206Q9H813 350 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 NRBP2Q9NSY0 501 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.68■□□□□ 0.1
USP39-207ENST00000450066 SLC5A4Q9NY91 659 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 ZNF236Q9UL36 1845 aa15.68■□□□□ 0.1
USP39-207ENST00000450066 KIF3CO14782 793 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 SLC16A3O15427 465 aaKnown RBP15.67■□□□□ 0.1
USP39-207ENST00000450066 TLR2O60603 784 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 CASP14P31944 242 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 KCNJ6P48051 423 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 PEX3P56589 373 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 GOLGA8FQ08AF8 430 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 GOLGA8DPQ0D2H9 430 aa15.67■□□□□ 0.1
USP39-207ENST00000450066 SREBF2Q12772 1141 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms