RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 TRAPPC12Q8WVT3 735 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 DNAJB3Q8WWF6 145 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 CLP1Q92989 425 aaKnown RBP19.81■□□□□ 0.76
FAM3A-216ENST00000449971 GTF3C6Q969F1 213 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 PLAGL2Q9UPG8 496 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 SAMM50Q9Y512 469 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 MRPL42Q9Y6G3 142 aaKnown RBP19.81■□□□□ 0.76
FAM3A-216ENST00000449971 KAT6AQ92794 2004 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 USP34Q70CQ2 3546 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 COL4A6Q14031 1691 aa19.81■□□□□ 0.76
FAM3A-216ENST00000449971 CCDC194A0A1B0GVG4 234 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 PSAPP07602 524 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 DNAJB1P25685 340 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 ADAM15Q13444 863 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 INF2Q27J81 1249 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 TRIM67Q6ZTA4 783 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 CKAP2LQ8IYA6 745 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 PPP2R3CQ969Q6 453 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 FAM49AQ9H0Q0 323 aaPredicted RBP19.8■□□□□ 0.76
FAM3A-216ENST00000449971 FAM86C1Q9NVL1 165 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 PCDHA10Q9Y5I2 948 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 CDY2AQ9Y6F7 541 aa19.8■□□□□ 0.76
FAM3A-216ENST00000449971 HBP1O60381 514 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 GAS7O60861 476 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 TDP2O95551 362 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 FDPSP14324 419 aaKnown RBP19.79■□□□□ 0.76
FAM3A-216ENST00000449971 NRIP1P48552 1158 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 PTPN5P54829 565 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 Q4G0T1 1027 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 TRMT1LQ7Z2T5 733 aaKnown RBP19.79■□□□□ 0.76
FAM3A-216ENST00000449971 SMAP1Q8IYB5 467 aaPredicted RBP19.79■□□□□ 0.76
FAM3A-216ENST00000449971 ATP8B4Q8TF62 1192 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 RIT2Q99578 217 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 RC3H2Q9HBD1 1191 aaKnown RBP19.79■□□□□ 0.76
FAM3A-216ENST00000449971 BARX2Q9UMQ3 279 aaPredicted RBP19.79■□□□□ 0.76
FAM3A-216ENST00000449971 PCDHGC5Q9Y5F6 944 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 ZDBF2Q9HCK1 2354 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 CFAP54Q96N23 3096 aa19.79■□□□□ 0.76
FAM3A-216ENST00000449971 CYP3A7-CYP3A51PA0A087WV96 503 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 ITGB1P05556 798 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 CYP3A7P24462 503 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 CD52P31358 61 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 MGAT3Q09327 533 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 CAMK1Q14012 370 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 LRCH2Q5VUJ6 765 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 KLHL23Q8NBE8 558 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 NSUN7Q8NE18 718 aaKnown RBP19.78■□□□□ 0.76
FAM3A-216ENST00000449971 OXER1Q8TDS5 423 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 SLC5A5Q92911 643 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 GJA10Q969M2 543 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 ZNF689Q96CS4 500 aaPredicted RBP19.78■□□□□ 0.76
FAM3A-216ENST00000449971 MSLNLQ96KJ4 702 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 RPGRIP1Q96KN7 1286 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 PLVAPQ9BX97 442 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 TEKT3Q9BXF9 490 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 GABBR1Q9UBS5 961 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 LIMCH1Q9UPQ0 1083 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 PCDHA2Q9Y5H9 948 aa19.78■□□□□ 0.76
FAM3A-216ENST00000449971 WDR64B1ANS9 1081 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 CHMP2AO43633 222 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 JAK2O60674 1132 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 DGKIO75912 1065 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 ATP4AP20648 1035 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 KLRC1P26715 233 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 GATMP50440 423 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 LETM2Q2VYF4 491 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 FBXO47Q5MNV8 452 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 MTHFD1LQ6UB35 978 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 PIK3AP1Q6ZUJ8 805 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 POF1BQ8WVV4 589 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 AGO3Q9H9G7 860 aaKnown RBP19.77■□□□□ 0.76
FAM3A-216ENST00000449971 DISC1Q9NRI5 854 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 CLEC1BQ9P126 229 aa19.77■□□□□ 0.76
FAM3A-216ENST00000449971 DDX25Q9UHL0 483 aaKnown RBP19.77■□□□□ 0.76
FAM3A-216ENST00000449971 MAFBQ9Y5Q3 323 aaPredicted RBP19.77■□□□□ 0.76
FAM3A-216ENST00000449971 TTC3P53804 2025 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 FOSBP53539 338 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 MRPS6P82932 125 aaKnown RBP19.76■□□□□ 0.75
FAM3A-216ENST00000449971 ZXDAP98168 799 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 TMEM62Q0P6H9 643 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 ZNF484Q5JVG2 852 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 SPOUT1Q5T280 376 aaKnown RBP19.76■□□□□ 0.75
FAM3A-216ENST00000449971 IER5Q5VY09 327 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 MOXD1Q6UVY6 613 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 TSHZ1Q6ZSZ6 1077 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 SPPL3Q8TCT6 385 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 MICAL1Q8TDZ2 1067 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 LINC01599Q8WXQ3 324 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 UNC45AQ9H3U1 944 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 BRMS1Q9HCU9 246 aa19.76■□□□□ 0.75
FAM3A-216ENST00000449971 USP15Q9Y4E8 981 aaPredicted RBP19.76■□□□□ 0.75
FAM3A-216ENST00000449971 M0QZ92 97 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 PER2O15055 1255 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 EYA4O95677 639 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 RPLP2P05387 115 aaKnown RBP19.75■□□□□ 0.75
FAM3A-216ENST00000449971 KRT2P35908 639 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 TCF15Q12870 199 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 TRIM29Q14134 588 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 BMP8AQ7Z5Y6 402 aa19.75■□□□□ 0.75
FAM3A-216ENST00000449971 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms