RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 OVOS2A0A0G2JMS6 1433 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 HSPA9P38646 679 aaKnown RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 KIAA0825Q8IV33 1275 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 GCNT4Q9P109 453 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 TCP10L2B9ZVM9 353 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 MCF2LO15068 1137 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 SRGAP2O75044 1071 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 RPS6KA4O75676 772 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 CCNA1P78396 465 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 ART3Q13508 389 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 FBXW10Q5XX13 1052 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 WDR75Q8IWA0 830 aaKnown RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 GRAPQ13588 217 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 PTPN21Q16825 1174 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 CCNI2Q6ZMN8 369 aaPredicted RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 GRAPLQ8TC17 118 aaPredicted RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 TGS1Q96RS0 853 aaKnown RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 IRAK4Q9NWZ3 460 aa14.93□□□□□ -0.02
ITGB4-202ENST00000449880 PAIP2BQ9ULR5 123 aaKnown RBP14.93□□□□□ -0.02
ITGB4-202ENST00000449880 INPP1P49441 399 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 PCYT1AP49585 367 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 C16orf87Q6PH81 154 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 ARHGAP27Q6ZUM4 889 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 ATG9AQ7Z3C6 839 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 ANKRD27Q96NW4 1050 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 TMEM206Q9H813 350 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 CAPN11Q9UMQ6 739 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 SATB2Q9UPW6 733 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 PCDHB6Q9Y5E3 794 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 XPOTO43592 962 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 TMEM191BP0C7N4 346 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 SLFN13Q68D06 897 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 MMS19Q96T76 1030 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 TRIM28Q13263 835 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 BSPRYQ5W0U4 402 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 DYDC2Q96IM9 177 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 IPO11Q9UI26 975 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 SNX12Q9UMY4 172 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 DMP1Q13316 513 aaPredicted RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 PODNQ7Z5L7 613 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 SPATA4Q8NEY3 305 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 FAM167BQ9BTA0 163 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 MAML1Q92585 1016 aa14.92□□□□□ -0.02
ITGB4-202ENST00000449880 TRIM56Q9BRZ2 755 aaKnown RBP14.92□□□□□ -0.02
ITGB4-202ENST00000449880 A0A1B0GTH6 734 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RASA4BC9J798 803 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RASA4O43374 803 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 KRT37O76014 449 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ZFXP17010 805 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 TFDP1Q14186 410 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ASPRV1Q53RT3 343 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 C1orf146Q5VVC0 180 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 UNC13DQ70J99 1090 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 SPATA21Q7Z572 469 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ICA1LQ8NDH6 482 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 SUGCTQ9HAC7 445 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 LIMA1Q9UHB6 759 aaKnown RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 H7C0C1 242 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 DDIT3P35638 169 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ATP5OP48047 213 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RAB44Q7Z6P3 723 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RFX6Q8HWS3 928 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 TBC1D10CQ8IV04 446 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 GSPT2Q8IYD1 628 aaKnown RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 MAD1L1Q9Y6D9 718 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 FAM107AO95990 144 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 KRT1P04264 644 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 SERPINB4P48594 390 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 KCTD2Q14681 263 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RNF207Q6ZRF8 634 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ELOA2Q8IYF1 753 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 TBK1Q9UHD2 729 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 RIMS1Q86UR5 1692 aaKnown RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 PSMD14O00487 310 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 PPP1R12AO14974 1030 aaPredicted RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 HDLBPQ00341 1268 aaKnown RBP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 ABCB5Q2M3G0 1257 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 SESTD1Q86VW0 696 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 PPCSQ9HAB8 311 aa14.91□□□□□ -0.02
ITGB4-202ENST00000449880 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.91□□□□□ -0.02
ITGB4-202ENST00000449880 CYP2D7A0A087X1C5 515 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 CCDC22O60826 627 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 GFPT2O94808 682 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 ATP1A1P05023 1023 aaKnown RBP14.9□□□□□ -0.02
ITGB4-202ENST00000449880 POLGP54098 1239 aaPredicted RBP14.9□□□□□ -0.02
ITGB4-202ENST00000449880 KAZNQ674X7 775 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 PDIK1LQ8N165 341 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 PLA2G12BQ9BX93 195 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 MRPL46Q9H2W6 279 aaKnown RBP14.9□□□□□ -0.02
ITGB4-202ENST00000449880 MAN1A2O60476 641 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 ABL1P00519 1130 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 IRAK1P51617 712 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 ACCSQ96QU6 501 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 NARFQ9UHQ1 456 aa14.9□□□□□ -0.02
ITGB4-202ENST00000449880 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms