RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 KCNJ6P48051 423 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-211ENST00000449704 DRP2Q13474 957 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 BECN1Q14457 450 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 SF3A1Q15459 793 aaKnown RBP17.55■□□□□ 0.4
TOP3B-211ENST00000449704 HAUS3Q68CZ6 603 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 LINC01465Q8N7H1 131 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 IGSF22Q8N9C0 903 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 SNX29Q8TEQ0 813 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 SLC7A3Q8WY07 619 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 ZNF668Q96K58 619 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-211ENST00000449704 JPH2Q9BR39 696 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-211ENST00000449704 ZSCAN16Q9H4T2 348 aaPredicted RBP17.55■□□□□ 0.4
TOP3B-211ENST00000449704 ANKEF1Q9NU02 776 aa17.55■□□□□ 0.4
TOP3B-211ENST00000449704 IGKV6-21A0A0C4DH24 114 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 PP2D1A8MPX8 630 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 ATP2A2P16615 1042 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 CDC25AP30304 524 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 CD52P31358 61 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 RFC5P40937 340 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 NLRP11P59045 1033 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 SMAD3P84022 425 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 CEBPZQ03701 1054 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 KRT79Q5XKE5 535 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 ARL6IP4Q66PJ3 421 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 TSHZ1Q6ZSZ6 1077 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 EXOC8Q8IYI6 725 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 SCLT1Q96NL6 688 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 OSMRQ99650 979 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 AGO3Q9H9G7 860 aaKnown RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 SUCLA2Q9P2R7 463 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-211ENST00000449704 PPME1Q9Y570 386 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 CLIC4Q9Y696 253 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 STK24Q9Y6E0 443 aa17.54■□□□□ 0.4
TOP3B-211ENST00000449704 MYH9P35579 1960 aaKnown RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 KDM3AQ9Y4C1 1321 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 EFCAB14O75071 495 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 GPR32O75388 356 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 XRCC6P12956 609 aaKnown RBP eCLIP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 CRYBB1P53674 252 aaPredicted RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 WDR5P61964 334 aaKnown RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 ZRSR1Q15695 479 aaKnown RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 USP38Q8NB14 1042 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 APBB2Q92870 758 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 DHX33Q9H6R0 707 aaKnown RBP17.53■□□□□ 0.4
TOP3B-211ENST00000449704 SCN5AQ14524 2016 aa17.53■□□□□ 0.4
TOP3B-211ENST00000449704 RPS6KA5O75582 802 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 ZSCAN22P10073 491 aaPredicted RBP17.52■□□□□ 0.4
TOP3B-211ENST00000449704 RARRES1P49788 294 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 GPC3P51654 580 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 NFX1Q12986 1120 aaKnown RBP17.52■□□□□ 0.4
TOP3B-211ENST00000449704 PAK2Q13177 524 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 EMC2Q15006 297 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 ECM1Q16610 540 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 RHPN2Q8IUC4 686 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 TMEM40Q8WWA1 233 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 NLRP7Q8WX94 980 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 SLC9A7Q96T83 725 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 ADAMTS10Q9H324 1103 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 PADI3Q9ULW8 664 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 KIAA1024Q9UPX6 916 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.4
TOP3B-211ENST00000449704 SQORQ9Y6N5 450 aa17.52■□□□□ 0.4
TOP3B-211ENST00000449704 TET1Q8NFU7 2136 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 LAMA3Q16787 3333 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 MUTP22033 750 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 RABGGTBP53611 331 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 DEFB103AP81534 67 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
TOP3B-211ENST00000449704 TMCO2Q7Z6W1 182 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-211ENST00000449704 MYOCDQ8IZQ8 938 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 ZNF710Q8N1W2 664 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 PHOSPHO2Q8TCD6 241 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 MTRQ99707 1265 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 ATP6V0A4Q9HBG4 840 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 DDX19AQ9NUU7 478 aaKnown RBP17.51■□□□□ 0.39
TOP3B-211ENST00000449704 MSRAQ9UJ68 235 aa17.51■□□□□ 0.39
TOP3B-211ENST00000449704 DBR1Q9UK59 544 aaKnown RBP17.51■□□□□ 0.39
TOP3B-211ENST00000449704 ARHGEF35A5YM69 484 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 USO1O60763 962 aaKnown RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 DGAT1O75907 488 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 AMHP03971 560 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 MARCKSP29966 332 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 PBX2P40425 430 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 PKP1Q13835 747 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 FAM117BQ6P1L5 589 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 KSR1Q8IVT5 923 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 HERC6Q8IVU3 1022 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 TCP11Q8WWU5 503 aa17.5■□□□□ 0.39
TOP3B-211ENST00000449704 PRPF31Q8WWY3 499 aaKnown RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 PSPC1Q8WXF1 523 aaKnown RBP17.5■□□□□ 0.39
TOP3B-211ENST00000449704 NLRP4Q96MN2 994 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms