RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 PLA2G4AP47712 749 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 TNNI2P48788 182 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 FXR1P51114 621 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMC6-207ENST00000448223 MAGOHP61326 146 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 SPARCL1Q14515 664 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 ADCK1Q86TW2 530 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 KIRREL3Q8IZU9 778 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CATSPER1Q8NEC5 780 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 PSPC1Q8WXF1 523 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 CCT8L2Q96SF2 557 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CHP1Q99653 195 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 ZMYND8Q9ULU4 1186 aaPredicted RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 ARHGAP26Q9UNA1 814 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 BZW2Q9Y6E2 419 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 SMAPO00193 183 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CAPN9O14815 690 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CALM1P0DP23 149 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CALM2P0DP24 149 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CALM3P0DP25 149 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 RABGAP1LQ5R372 815 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 DCUN1D2Q6PH85 259 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 OTUD6AQ7L8S5 288 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CDR2LQ86X02 465 aaPredicted RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 MAPKAPK5Q8IW41 473 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 REXO1L1PQ8IX06 675 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 FAM133AQ8N9E0 248 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 RIN2Q8WYP3 895 aaPredicted RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 HPS3Q969F9 1004 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 DYNLL2Q96FJ2 89 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CNBD2Q96M20 576 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 AGXT2Q9BYV1 514 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 SNX25Q9H3E2 840 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 KRT31Q15323 416 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 KCTD19Q17RG1 926 aaPredicted RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 CYB5D1Q6P9G0 228 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 SLC26A7Q8TE54 656 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 SCYL1Q96KG9 808 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 ATP6V1G3Q96LB4 118 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 SLC39A2Q9NP94 309 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 TRPC6Q9Y210 931 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 LRRC37A3O60309 1634 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 MT-ND3P03897 115 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 UBTFL6P0CB48 400 aaPredicted RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 YY1P25490 414 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 STAT1P42224 750 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 EIF2B2P49770 351 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 COPB1P53618 953 aaKnown RBP9.88□□□□□ -0.83
SMC6-207ENST00000448223 PDE1BQ01064 536 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 RASSF7Q02833 373 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 SEMA3FQ13275 785 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 COG1Q8WTW3 980 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 TRIM15Q9C019 465 aa9.88□□□□□ -0.83
SMC6-207ENST00000448223 BCRP11274 1271 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 ACADSP16219 412 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 RBM5P52756 815 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMC6-207ENST00000448223 EPHB1P54762 984 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 NONOQ15233 471 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMC6-207ENST00000448223 CCDC85BQ15834 202 aaPredicted RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 CNGA3Q16281 694 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 CYP4F22Q6NT55 531 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TMEM165Q9HC07 324 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 RWDD3Q9Y3V2 267 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 JCADQ9P266 1359 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 CALUO43852 315 aaPredicted RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 E2F6O75461 281 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 GRK2P25098 689 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 CASP7P55210 303 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 KPNB1Q14974 876 aaKnown RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 RCSD1Q6JBY9 416 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 C17orf50Q8WW18 174 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.838e-7■■■■□ 24.2
SMC6-207ENST00000448223 PTPN22Q9Y2R2 807 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 H7C1D1 291 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 DDHD2O94830 711 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 BMP6P22004 513 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 CASP2P42575 452 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TECP42680 631 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TOB1P50616 345 aaPredicted RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 PTPAQ15257 358 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 KBTBD12Q3ZCT8 623 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 KLC3Q6P597 504 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 BTNL9Q6UXG8 535 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 NELFCDQ8IXH7 590 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 AGGF1Q8N302 714 aaeCLIP9.87□□□□□ -0.83
SMC6-207ENST00000448223 DTX3LQ8TDB6 740 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 GMEB1Q9Y692 573 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TMEM191CA6NGB0 347 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TMEM191BP0C7N4 346 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 YWHAGP61981 247 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMC6-207ENST00000448223 LSM14BQ9BX40 385 aaKnown RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 MRPS26Q9BYN8 205 aaKnown RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 KANSL2Q9H9L4 492 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 TUBE1Q9UJT0 475 aa9.87□□□□□ -0.83
SMC6-207ENST00000448223 SRPRBQ9Y5M8 271 aaKnown RBP9.87□□□□□ -0.83
SMC6-207ENST00000448223 ADGRG1Q9Y653 693 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms