RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 MRPL38Q96DV4 380 aaKnown RBP19.93■□□□□ 0.78
DDX56-207ENST00000448192 RC3H2Q9HBD1 1191 aaKnown RBP19.93■□□□□ 0.78
DDX56-207ENST00000448192 SEPT9Q9UHD8 586 aaPredicted RBP19.93■□□□□ 0.78
DDX56-207ENST00000448192 LRFN2Q9ULH4 789 aa19.93■□□□□ 0.78
DDX56-207ENST00000448192 ST3GAL5Q9UNP4 418 aa19.93■□□□□ 0.78
DDX56-207ENST00000448192 DENND3A2RUS2 1198 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 GPR182O15218 404 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 MARCH6O60337 910 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 GPR32O75388 356 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 STAG3L1P0CL83 205 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 KRT2P35908 639 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 KCNQ1P51787 676 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 NLRP11P59045 1033 aaKnown RBP19.92■□□□□ 0.78
DDX56-207ENST00000448192 TBC1D8BQ0IIM8 1120 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 PPP4R3AQ6IN85 833 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 B3GNT9Q6UX72 402 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 BANK1Q8NDB2 785 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 NSUN7Q8NE18 718 aaKnown RBP19.92■□□□□ 0.78
DDX56-207ENST00000448192 ADAMTS19Q8TE59 1207 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 ADAM2Q99965 735 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 BRMS1Q9HCU9 246 aa19.92■□□□□ 0.78
DDX56-207ENST00000448192 TMEM150BA6NC51 233 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 MGEA5O60502 916 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 GCFC2P16383 781 aaKnown RBP19.91■□□□□ 0.78
DDX56-207ENST00000448192 BMPR1AP36894 532 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 FOSBP53539 338 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 NR5A1Q13285 461 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 MTERF2Q49AM1 385 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 PAN2Q504Q3 1202 aaKnown RBP19.91■□□□□ 0.78
DDX56-207ENST00000448192 XKR3Q5GH77 459 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
DDX56-207ENST00000448192 FAM228AQ86W67 206 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 CRIPAKQ8N1N5 446 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 ZNF668Q96K58 619 aaPredicted RBP19.91■□□□□ 0.78
DDX56-207ENST00000448192 FAM20AQ96MK3 541 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 NAP1L4Q99733 375 aaKnown RBP19.91■□□□□ 0.78
DDX56-207ENST00000448192 KCNMB3Q9NPA1 279 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 RWDD3Q9Y3V2 267 aa19.91■□□□□ 0.78
DDX56-207ENST00000448192 FAM205CA6NFA0 338 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 DDX11L8A8MPP1 907 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 JAK2O60674 1132 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 SARSP49591 514 aaKnown RBP19.9■□□□□ 0.78
DDX56-207ENST00000448192 LINC01465Q8N7H1 131 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 SCLT1Q96NL6 688 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 SH2D3AQ9BRG2 576 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 C11orf84Q9BUA3 381 aaPredicted RBP19.9■□□□□ 0.78
DDX56-207ENST00000448192 NIFKQ9BYG3 293 aaKnown RBP19.9■□□□□ 0.78
DDX56-207ENST00000448192 PCDHB7Q9Y5E2 793 aa19.9■□□□□ 0.78
DDX56-207ENST00000448192 EML1O00423 815 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 RB1P06400 928 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 LINC00271P0C7V0 271 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 BMP1P13497 986 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 GATMP50440 423 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 PPP2R5CQ13362 524 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 TRIM29Q14134 588 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 TARBP2Q15633 366 aaKnown RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 ATG2AQ2TAZ0 1938 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 FNDC1Q4ZHG4 1894 aaPredicted RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 FAM43BQ6ZT52 329 aaPredicted RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 POTEDQ86YR6 584 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 CMTR2Q8IYT2 770 aaKnown RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 CLP1Q92989 425 aaKnown RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 UHRF1Q96T88 793 aaPredicted RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 RGS18Q9NS28 235 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 C1orf112Q9NSG2 853 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 VAV3Q9UKW4 847 aa19.89■□□□□ 0.77
DDX56-207ENST00000448192 MRPL42Q9Y6G3 142 aaKnown RBP19.89■□□□□ 0.77
DDX56-207ENST00000448192 TTC28Q96AY4 2481 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 C5orf67F2Z3F1 127 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 TNFRSF10AO00220 468 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 STBD1O95210 358 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 PSMC5P62195 406 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 TIGD5Q53EQ6 642 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 SLC24A5Q71RS6 500 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 ADAMTS10Q9H324 1103 aa19.88■□□□□ 0.77
DDX56-207ENST00000448192 RNF216Q9NWF9 866 aaPredicted RBP19.88■□□□□ 0.77
DDX56-207ENST00000448192 C9IYK1 514 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 TBX3O15119 743 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 GRM6O15303 877 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 BAG4O95429 457 aaKnown RBP19.87■□□□□ 0.77
DDX56-207ENST00000448192 MMP1P03956 469 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 EIF4BP23588 611 aaKnown RBP19.87■□□□□ 0.77
DDX56-207ENST00000448192 QARSP47897 775 aaKnown RBP19.87■□□□□ 0.77
DDX56-207ENST00000448192 DNM2P50570 870 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 GPC3P51654 580 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 DRP2Q13474 957 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 ZNF710Q8N1W2 664 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 NLRP7Q8WX94 980 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 HAS1Q92839 578 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 TNFRSF25Q93038 417 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 NECAB3Q96P71 396 aaPredicted RBP19.87■□□□□ 0.77
DDX56-207ENST00000448192 UBE2ZQ9H832 354 aaPredicted RBP19.87■□□□□ 0.77
DDX56-207ENST00000448192 LIMCH1Q9UPQ0 1083 aa19.87■□□□□ 0.77
DDX56-207ENST00000448192 MUC3AQ02505 3323 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 BTBD18B2RXH4 712 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 CSPG5O95196 566 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 ST3GAL1Q11201 340 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 TCEAL5Q5H9L2 206 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 PLA2G4FQ68DD2 849 aa19.86■□□□□ 0.77
DDX56-207ENST00000448192 NCAPH2Q6IBW4 605 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms