RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	KIAA1551	Q9HCM1	1747 aa		4.58	□□□□□ -1.68
PTPN12-208	ENST00000447995	IRS2	Q9Y4H2	1338 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CYP2D7	A0A087X1C5	515 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC194	A0A1B0GVG4	234 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	LAD1	O00515	517 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZSCAN12	O43309	604 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CTIF	O43310	598 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	UFL1	O94874	794 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	PLEKHA8P1	O95397	391 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	MYL1	P05976	194 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TPM1	P09493	284 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM87A	P0C7U9	286 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TSPY3	P0CV98	308 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TSPY8	P0CW00	308 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CD8B	P10966	210 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TOP1	P11387	765 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ATP2B1	P20020	1258 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	KLRK1	P26718	216 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SMARCA1	P28370	1054 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	PRDX5	P30044	214 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	LONP1	P36776	959 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SARS	P49591	514 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ATP2C1	P98194	919 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TFAP4	Q01664	338 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPAG1	Q07617	926 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	AP3B2	Q13367	1082 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ORC2	Q13416	577 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	NFIX	Q14938	502 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CYP27C1	Q4G0S4	372 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	FILIP1L	Q4L180	1135 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM196A	Q6ZSG2	479 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ATG4D	Q86TL0	474 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	VSTM4	Q8IW00	320 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	BLID	Q8IZY5	108 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCAR2	Q8N163	923 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	PDCL2	Q8N4E4	241 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SRBD1	Q8N5C6	995 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	DAGLB	Q8NCG7	672 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	LRRN4CL	Q8ND94	238 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ANKRD20A12P	Q8NF67	263 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPATA20	Q8TB22	786 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF384	Q8TF68	577 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM168A	Q92567	244 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	ERCC4	Q92889	916 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC47	Q96A33	483 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	C16orf45	Q96MC5	204 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CSRNP2	Q9H175	543 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	MAGEF1	Q9HAY2	307 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	NPHS2	Q9NP85	383 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	MBNL3	Q9NUK0	354 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	CRIM1	Q9NZV1	1036 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	TRPC5	Q9UL62	973 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHA4	Q9UN74	947 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	MTMR7	Q9Y216	660 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	SUGT1	Q9Y2Z0	365 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	PCDHGC5	Q9Y5F6	944 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	LY75	O60449	1722 aa		4.57	□□□□□ -1.68
PTPN12-208	ENST00000447995	MYH13	Q9UKX3	1938 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CCDC88A	Q3V6T2	1871 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SYNRG	Q9UMZ2	1314 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995		A0A087WWV3	80 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	GPR75-ASB3	A0A0A6YYF3	556 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	VWA3A	A6NCI4	1184 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	UBE2Q2L	H0YL09	131 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	hCG_1984214	I3L0E3	225 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ARHGAP6	O43182	974 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF862	O60290	1169 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ABL1	P00519	1130 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CYP2D6	P10635	497 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	IL1R1	P14778	569 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	GNA11	P29992	359 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	HOXA7	P31268	230 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CD96	P40200	585 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PRPH	P41219	470 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PPP1R2	P41236	205 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	RBM10	P98175	930 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	STIM1	Q13586	685 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF174	Q15697	407 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CRY2	Q49AN0	593 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	FAM47A	Q5JRC9	791 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SOGA3	Q5TF21	947 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPATA1	Q5VX52	437 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPECC1L	Q69YQ0	1117 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PRR5L	Q6MZQ0	368 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ARMCX5	Q6P1M9	558 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PIK3AP1	Q6ZUJ8	805 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	TEX11	Q8IYF3	940 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PDILT	Q8N807	584 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ZNF713	Q8N859	430 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	NETO1	Q8TDF5	533 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	DHX58	Q96C10	678 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	WDR89	Q96FK6	387 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	PAGE5	Q96GU1	130 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	ERO1A	Q96HE7	468 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	FANCD2OS	Q96PS1	177 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	CRAMP1	Q96RY5	1269 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SPZ1	Q9BXG8	430 aa		4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	NAA15	Q9BXJ9	866 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-208	ENST00000447995	SRRT	Q9BXP5	876 aa	Known RBP	4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 418.6 ms