RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 GNGT1P63211 74 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 AMPD3Q01432 767 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GSPT2Q8IYD1 628 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 IQUBQ8NA54 791 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 CABS1Q96KC9 395 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 WBP1LQ9NX94 342 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 MRFAP1Q9Y605 127 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6CA6NDK9 693 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 OPLAHO14841 1288 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 ARHGAP6O43182 974 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6DP0CG33 693 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 JAK3P52333 1124 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 ARL6IP4Q66PJ3 421 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 SWSAP1Q6NVH7 229 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.52□□□□□ -1.37
PROM1-201ENST00000447510 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 SRGAP1Q7Z6B7 1085 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 CTU1Q7Z7A3 348 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 SH3TC2Q8TF17 1288 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 PDGFCQ9NRA1 345 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 NRBP2Q9NSY0 501 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6AQ9NYA3 693 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 RCOR1Q9UKL0 485 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 KCNH3Q9ULD8 1083 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 KIAA1024Q9UPX6 916 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 DIS3Q9Y2L1 958 aaKnown RBP6.52□□□□□ -1.37
PROM1-201ENST00000447510 SIPA1L1O43166 1804 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 TRPM7Q96QT4 1865 aa6.52□□□□□ -1.37
PROM1-201ENST00000447510 MEIS1O00470 390 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 ADAMTS3O15072 1205 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 POLR2DO15514 142 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 TBCAO75347 108 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 TOB1P50616 345 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 ATP1A2P50993 1020 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 LAMC2Q13753 1193 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CTTNQ14247 550 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 MTF1Q14872 753 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 XKR9Q5GH70 373 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 BEND6Q5SZJ8 279 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 PPP4R3CPQ6ZMV5 832 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 OTUD6AQ7L8S5 288 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 IGSF22Q8N9C0 903 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SLAIN1Q8ND83 568 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SEPT1Q8WYJ6 367 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SYMPKQ92797 1274 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 MAF1Q9H063 256 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 NT5C3AQ9H0P0 336 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SEPT9Q9UHD8 586 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 PCDHA10Q9Y5I2 948 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SRPRBQ9Y5M8 271 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 TBX3O15119 743 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 FANCGO15287 622 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 PPP6R2O75170 966 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CLSTN1O94985 981 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CYP3A4P08684 503 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 TGFB3P10600 412 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SFNP31947 248 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 NDUFA8P51970 172 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 ATP2C1P98194 919 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 ZNF792Q3KQV3 632 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 MAP9Q49MG5 647 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 GJC2Q5T442 439 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 SWT1Q5T5J6 900 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 ADALQ6DHV7 355 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 IQSEC1Q6DN90 963 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 MOXD1Q6UVY6 613 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 OTOP1Q7RTM1 612 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 COPS5Q92905 334 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 RIT2Q99578 217 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CPSF2Q9P2I0 782 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 GABBR1Q9UBS5 961 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 GINS2Q9Y248 185 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 PTCH2Q9Y6C5 1203 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 ZNF646O15015 1829 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 KDM3AQ9Y4C1 1321 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 PPP1R12AO14974 1030 aaPredicted RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 INHAP05111 366 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 ITGB5P18084 799 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 MATR3P43243 847 aaKnown RBP eCLIP6.51□□□□□ -1.37
PROM1-201ENST00000447510 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 NPY5RQ15761 445 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 Q4G0T1 1027 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CEP85LQ5SZL2 805 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 KLHL10Q6JEL2 608 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 SV2BQ7L1I2 683 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 RNF180Q86T96 592 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 METTL13Q8N6R0 699 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 AFG1LQ8WV93 481 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 ATRIPQ8WXE1 791 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 AK8Q96MA6 479 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 LRRC27Q9C0I9 530 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 AGO4Q9HCK5 861 aaKnown RBP6.51□□□□□ -1.37
PROM1-201ENST00000447510 ZNF302Q9NR11 478 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 KIAA1468Q9P260 1216 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 UBIAD1Q9Y5Z9 338 aa6.51□□□□□ -1.37
PROM1-201ENST00000447510 CTAGE9A4FU28 777 aa6.5□□□□□ -1.37
PROM1-201ENST00000447510 GOLGA6L9A6NEM1 432 aa6.5□□□□□ -1.37
PROM1-201ENST00000447510 LRRIQ3A6PVS8 624 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms