RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 SCNM1Q9BWG6 230 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 ATP6V0A4Q9HBG4 840 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 EXOC6BQ9Y2D4 811 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 CELSR3Q9NYQ7 3312 aa16.57■□□□□ 0.24
SYNCRIP-203ENST00000444272 CLUHO75153 1309 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 M0QZ92 97 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 APPP05067 770 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 TGFB3P10600 412 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 TDGF1P13385 188 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 NOVA1P51513 510 aaKnown RBP16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 NRLP54845 237 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 PRKCQQ04759 706 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZBTB41Q5SVQ8 909 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 MCF2L2Q86YR7 1114 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 VPS52Q8N1B4 723 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 SLC39A11Q8N1S5 342 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 C12orf50Q8NA57 414 aaPredicted RBP16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZBTB10Q96DT7 871 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 ADAM2Q99965 735 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 MAF1Q9H063 256 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZBP1Q9H171 429 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 TELO2Q9Y4R8 837 aa16.56■□□□□ 0.24
SYNCRIP-203ENST00000444272 ABCB11O95342 1321 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 GIPC1O14908 333 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 HSPD1P10809 573 aaKnown RBP16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 MTAPQ13126 283 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 HTR4Q13639 388 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 GRIK4Q16099 956 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 SLC24A5Q71RS6 500 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 LRRC43Q8N309 656 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 CASD1Q96PB1 797 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 PDCD2LQ9BRP1 358 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 TMEM117Q9H0C3 514 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 WDR6Q9NNW5 1121 aaKnown RBP16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 RGS18Q9NS28 235 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 C1orf112Q9NSG2 853 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 GPSM3Q9Y4H4 160 aa16.55■□□□□ 0.24
SYNCRIP-203ENST00000444272 MBLAC1A4D2B0 266 aaPredicted RBP16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 C9IYK1 514 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 NT5C1B-RDH14C9J2C7 533 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 TARSP26639 723 aaKnown RBP16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 METAP2P50579 478 aaKnown RBP eCLIP16.54■□□□□ 0.249e-6■■■■□ 23.9
SYNCRIP-203ENST00000444272 WTAPQ15007 396 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 SLC44A4Q53GD3 710 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 MARCH8Q5T0T0 291 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 CYFIP1Q7L576 1253 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 PPFIBP1Q86W92 1011 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 CLDN23Q96B33 292 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 KLHL5Q96PQ7 755 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 TMEM161AQ9NX61 479 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 IRAK3Q9Y616 596 aa16.54■□□□□ 0.24
SYNCRIP-203ENST00000444272 ANHXE9PGG2 379 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 PDHBP11177 359 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 LAMP2P13473 410 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 RPS9P46781 194 aaKnown RBP16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 IGBP1P78318 339 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 SP4Q02446 784 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 GIT2Q14161 759 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 COL28A1Q2UY09 1125 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 METTL7BQ6UX53 244 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 IL31RAQ8NI17 732 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 TMEM169Q96HH4 297 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 RPP25Q9BUL9 199 aaKnown RBP16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 TICRRQ7Z2Z1 1910 aa16.53■□□□□ 0.24
SYNCRIP-203ENST00000444272 NCAM2O15394 837 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 CFBP00751 764 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 MARK3P27448 753 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 NOVP48745 357 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 SRSF5Q13243 272 aaKnown RBP16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 VSIG10LQ86VR7 867 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 GLIS3Q8NEA6 775 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 CELF4Q9BZC1 486 aaKnown RBP16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
SYNCRIP-203ENST00000444272 KALRNO60229 2985 aa16.52■□□□□ 0.23
SYNCRIP-203ENST00000444272 MYH6P13533 1939 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 HRO43593 1189 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 RPLP2P05387 115 aaKnown RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 IFIT2P09913 472 aaKnown RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 CTSAP10619 480 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 CLCN4P51793 760 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 PPARAQ07869 468 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 ZNF543Q08ER8 600 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 PGM5Q15124 567 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 RSPO2Q6UXX9 243 aaPredicted RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 HNRNPABQ99729 332 aaKnown RBP16.51■□□□□ 0.23
SYNCRIP-203ENST00000444272 FAM217BQ9NTX9 383 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms