RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 BTG3Q14201 252 aaPredicted RBP15.78■□□□□ 0.12
TREX1-202ENST00000444177 FAM184AQ8NB25 1140 aa15.78■□□□□ 0.12
TREX1-202ENST00000444177 ETNPPLQ8TBG4 499 aa15.78■□□□□ 0.12
TREX1-202ENST00000444177 BBXQ8WY36 941 aaPredicted RBP15.78■□□□□ 0.12
TREX1-202ENST00000444177 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
TREX1-202ENST00000444177 UBE2ZQ9H832 354 aaPredicted RBP15.78■□□□□ 0.12
TREX1-202ENST00000444177 DISC1Q9NRI5 854 aa15.78■□□□□ 0.12
TREX1-202ENST00000444177 GINS2Q9Y248 185 aa15.78■□□□□ 0.12
TREX1-202ENST00000444177 COL4A6Q14031 1691 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 MARCH6O60337 910 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 PSMD10O75832 226 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 SFNP31947 248 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 CTNNB1P35222 781 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
TREX1-202ENST00000444177 NFX1Q12986 1120 aaKnown RBP15.77■□□□□ 0.12
TREX1-202ENST00000444177 SAFBQ15424 915 aaKnown RBP eCLIP15.77■□□□□ 0.12
TREX1-202ENST00000444177 TMEM266Q2M3C6 531 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 PPP4R3AQ6IN85 833 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 MIER3Q7Z3K6 550 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 POTEDQ86YR6 584 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 NPAS4Q8IUM7 802 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 BANK1Q8NDB2 785 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 CLP1Q92989 425 aaKnown RBP15.77■□□□□ 0.12
TREX1-202ENST00000444177 TNFRSF25Q93038 417 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 C8orf76Q96K31 380 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 NOC2LQ9Y3T9 749 aaKnown RBP15.77■□□□□ 0.12
TREX1-202ENST00000444177 RWDD3Q9Y3V2 267 aa15.77■□□□□ 0.12
TREX1-202ENST00000444177 EVPLQ92817 2033 aa15.77■□□□□ 0.11
TREX1-202ENST00000444177 C22orf31O95567 290 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 STAG3L1P0CL83 205 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 KCNA5P22460 613 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 PRKCEQ02156 737 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 UGCGQ16739 394 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 TIGD5Q53EQ6 642 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 FAM43BQ6ZT52 329 aaPredicted RBP15.76■□□□□ 0.11
TREX1-202ENST00000444177 METTL13Q8N6R0 699 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 FAM167AQ96KS9 214 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 ERVK-5Q9HDB9 667 aa15.76■□□□□ 0.11
TREX1-202ENST00000444177 MYH9P35579 1960 aaKnown RBP15.75■□□□□ 0.11
TREX1-202ENST00000444177 LOXHD1Q8IVV2 1947 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 GRM6O15303 877 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 MAGEB2O15479 319 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 RPS6KA5O75582 802 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 OATP04181 439 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 CRYBB1P53674 252 aaPredicted RBP15.75■□□□□ 0.11
TREX1-202ENST00000444177 KIZQ2M2Z5 673 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 LEXMQ3ZCV2 418 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 TCEAL5Q5H9L2 206 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 RDM1Q8NG50 284 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 TMEM40Q8WWA1 233 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 FAM20AQ96MK3 541 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
TREX1-202ENST00000444177 NSUN3Q9H649 340 aaKnown RBP15.75■□□□□ 0.11
TREX1-202ENST00000444177 KCNMB3Q9NPA1 279 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 NRBP2Q9NSY0 501 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 ST3GAL5Q9UNP4 418 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 CEP131Q9UPN4 1083 aa15.75■□□□□ 0.11
TREX1-202ENST00000444177 GPR182O15218 404 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 ZNF862O60290 1169 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 MGEA5O60502 916 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 GPR32O75388 356 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 CD2BP2O95400 341 aaKnown RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 GNL2Q13823 731 aaKnown RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 CMTR2Q8IYT2 770 aaKnown RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 PPP1R16BQ96T49 567 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 PLVAPQ9BX97 442 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 LMAN2LQ9H0V9 348 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 SEPT9Q9UHD8 586 aaPredicted RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 LRFN2Q9ULH4 789 aa15.74■□□□□ 0.11
TREX1-202ENST00000444177 MRPL42Q9Y6G3 142 aaKnown RBP15.74■□□□□ 0.11
TREX1-202ENST00000444177 WDR81Q562E7 1941 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 TBX3O15119 743 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 VTNP04004 478 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 SARSP49591 514 aaKnown RBP15.73■□□□□ 0.11
TREX1-202ENST00000444177 EFCAB12Q6NXP0 572 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 B3GNT9Q6UX72 402 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 OSMRQ99650 979 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 ADAM2Q99965 735 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 ALG13Q9NP73 1137 aaKnown RBP15.73■□□□□ 0.11
TREX1-202ENST00000444177 RGS18Q9NS28 235 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 PLAGL2Q9UPG8 496 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 PCDHB7Q9Y5E2 793 aa15.73■□□□□ 0.11
TREX1-202ENST00000444177 NLRC5Q86WI3 1866 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 DENND3A2RUS2 1198 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 EML1O00423 815 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 NEMFO60524 1076 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 BAG4O95429 457 aaKnown RBP15.72■□□□□ 0.11
TREX1-202ENST00000444177 ATP2B1P20020 1258 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 IBSPP21815 317 aaPredicted RBP15.72■□□□□ 0.11
TREX1-202ENST00000444177 TMOD1P28289 359 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 MCM2P49736 904 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 GATMP50440 423 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 CLCN3P51790 818 aa15.72■□□□□ 0.11
TREX1-202ENST00000444177 PPP2R5CQ13362 524 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms