RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 MSH4O15457 936 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 GAS7O60861 476 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 OATP04181 439 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 ITGB1P05556 798 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 HYAL1Q12794 435 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 TOB2Q14106 344 aaPredicted RBP18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 TMEM266Q2M3C6 531 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 PDE12Q6L8Q7 609 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 LINC01465Q8N7H1 131 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 RASGRP4Q8TDF6 673 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 TMEM40Q8WWA1 233 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 CDHR5Q9HBB8 845 aa18.43■□□□□ 0.54
CTDSP1-204ENST00000443891 ADAMTS3O15072 1205 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 SSTR3P32745 418 aaPredicted RBP18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 LTBRP36941 435 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 CAMK1Q14012 370 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 KIZQ2M2Z5 673 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 LRCH2Q5VUJ6 765 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 EFCAB12Q6NXP0 572 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 EP400NLQ6ZTU2 488 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 FAM228AQ86W67 206 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 ADHFE1Q8IWW8 467 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 KLHL23Q8NBE8 558 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 TBCKQ8TEA7 893 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 RSPH1Q8WYR4 309 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 POP1Q99575 1024 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 OSMRQ99650 979 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 LRFN3Q9BTN0 628 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 UPF3BQ9BZI7 483 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 ATP6V0A4Q9HBG4 840 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 ALG13Q9NP73 1137 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 CD320Q9NPF0 282 aa18.42■□□□□ 0.54
CTDSP1-204ENST00000443891 EDIL3O43854 480 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 MGEA5O60502 916 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 CDKL5O76039 1030 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 ZSCAN20P17040 1043 aaPredicted RBP18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 EIF4BP23588 611 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 ADAM15Q13444 863 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 SMAD4Q13485 552 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 DSC3Q14574 896 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 SMAD2Q15796 467 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 PAN2Q504Q3 1202 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 BLIDQ8IZY5 108 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 EFHBQ8N7U6 833 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 POF1BQ8WVV4 589 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 AKT3Q9Y243 479 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 HCN4Q9Y3Q4 1203 aa18.41■□□□□ 0.54
CTDSP1-204ENST00000443891 C19orf67A6NJJ6 358 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 M0R2N6 131 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 ZNF862O60290 1169 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 PSMD10O75832 226 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 VTNP04004 478 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 NLRP11P59045 1033 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 PRKCEQ02156 737 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 XKR3Q5GH77 459 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 MBOAT7Q96N66 472 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 CDCA3Q99618 268 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 NIFKQ9BYG3 293 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 TMEM117Q9H0C3 514 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 ADAMTS10Q9H324 1103 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 LZTS1Q9Y250 596 aa18.4■□□□□ 0.54
CTDSP1-204ENST00000443891 CARNS1A5YM72 827 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 TBKBP1A7MCY6 615 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 PRR33A8MZF0 331 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 EYA4O95677 639 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 NEFLP07196 543 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 XBP1P17861 261 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 LAG3P18627 525 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 CLCN3P51790 818 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 ZP2Q05996 745 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 TBC1D8BQ0IIM8 1120 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 NONOQ15233 471 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 25.2
CTDSP1-204ENST00000443891 TARBP2Q15633 366 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 SPOUT1Q5T280 376 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 B3GNT9Q6UX72 402 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 MIER3Q7Z3K6 550 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 KRT25Q7Z3Z0 450 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 UNC45AQ9H3U1 944 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 CD207Q9UJ71 328 aa18.39■□□□□ 0.53
CTDSP1-204ENST00000443891 MBTPS2O43462 519 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 DKC1O60832 514 aaKnown RBP eCLIP18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 EOMESO95936 686 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 DNM2P50570 870 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 GPC3P51654 580 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 KHSRPQ92945 711 aaKnown RBP eCLIP18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 UIMC1Q96RL1 719 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 CHST12Q9NRB3 414 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 PDRG1Q9NUG6 133 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 DACT1Q9NYF0 836 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 PUF60Q9UHX1 559 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 PPME1Q9Y570 386 aa18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 MYH9P35579 1960 aaKnown RBP18.38■□□□□ 0.53
CTDSP1-204ENST00000443891 DCXO43602 365 aa18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 DARSP14868 501 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 GCFC2P16383 781 aaKnown RBP18.37■□□□□ 0.53
CTDSP1-204ENST00000443891 DNAJB1P25685 340 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms