RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PPATQ06203 517 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 NTRK3Q16288 839 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 LARP1BQ659C4 914 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 FAM160B2Q86V87 743 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 ERO1BQ86YB8 467 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 TRIM42Q8IWZ5 723 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 NECAB1Q8N987 351 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 GPBAR1Q8TDU6 330 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 RRP36Q96EU6 259 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 C12orf42Q96LP6 360 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 NACC1Q96RE7 527 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 MAF1Q9H063 256 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 BRMS1Q9HCU9 246 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 KRT82Q9NSB4 513 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 PCDHA4Q9UN74 947 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 TCHHQ07283 1943 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 MYPNQ86TC9 1320 aa8.18□□□□□ -1.1
R3HDM1-210ENST00000443537 ADM5C9JUS6 153 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 F5H6K3 240 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 H3BQV1 296 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 RNF225M0QZC1 329 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 CXCL11O14625 94 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 BPNT1O95861 308 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 BMP3P12645 472 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 PTMSP20962 102 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 CALML3P27482 149 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 COL8A1P27658 744 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 STAT2P52630 851 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 BACE1P56817 501 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 KLRC3Q07444 240 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 ST3GAL1Q11201 340 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 SAFBQ15424 915 aaKnown RBP eCLIP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 EXOSC6Q5RKV6 272 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 SLFN13Q68D06 897 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 ATL3Q6DD88 541 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 MCTP2Q6DN12 878 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 FBXL19Q6PCT2 694 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 BTNL9Q6UXG8 535 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 BNC2Q6ZN30 1099 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 C2orf69Q8N8R5 385 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 C8orf76Q96K31 380 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 MYL10Q9BUA6 226 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 ZSCAN16Q9H4T2 348 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 RIOX1Q9H6W3 641 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 NCOA5Q9HCD5 579 aaKnown RBP8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 TMOD4Q9NZQ9 345 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 MAD2L2Q9UI95 211 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 FEM1BQ9UK73 627 aa8.17□□□□□ -1.1
R3HDM1-210ENST00000443537 ESYT2A0FGR8 921 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 USP2O75604 605 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 CTDNEP1O95476 244 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 DLGAP3O95886 979 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 NDUFB10O96000 172 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 F13A1P00488 732 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SLFN14P0C7P3 912 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SCG2P13521 617 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SYT1P21579 422 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 UTRNP46939 3433 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 PAK2Q13177 524 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 PABPC4Q13310 644 aaKnown RBP eCLIP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 PPIL2Q13356 520 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 VGLL4Q14135 290 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 PFKFB3Q16875 520 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC96Q2M329 555 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 CLEC17AQ6ZS10 378 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC84Q86UT8 332 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SAMD3Q8N6K7 520 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SMC1BQ8NDV3 1235 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 FBXO18Q8NFZ0 1043 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 BICD2Q8TD16 824 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 GBP4Q96PP9 640 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 SLC26A6Q9BXS9 759 aa8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 GLIS2Q9BZE0 524 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-210ENST00000443537 GOLGA6L22H0YM25 854 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 ZBTB5O15062 677 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 TLR3O15455 904 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 ZNF862O60290 1169 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 ZSCAN22P10073 491 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 ZBTB48P10074 688 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 RXRAP19793 462 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 GNA11P29992 359 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 RRP1BQ14684 758 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 NAALADL2Q58DX5 795 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 FASTKD5Q7L8L6 764 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 SIAH1Q8IUQ4 282 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 AGGF1Q8N302 714 aaeCLIP8.15□□□□□ -1.1
R3HDM1-210ENST00000443537 GAL3ST3Q96A11 431 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms