RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 SEL1L2Q5TEA6 688 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 CENPPQ6IPU0 288 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 DCUN1D2Q6PH85 259 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 TSPYL1Q9H0U9 437 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 ZNF302Q9NR11 478 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 NXF1Q9UBU9 619 aaKnown RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 KRIT1O00522 736 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 N4BP1O75113 896 aaKnown RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 ATP1A1P05023 1023 aaKnown RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 TMEM191BP0C7N4 346 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 TUBB4BP68371 445 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 KCNA1Q09470 495 aa11.51□□□□□ -0.57
CALD1-210ENST00000443197 DRAP1Q14919 205 aaPredicted RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 SYTL5Q8TDW5 730 aaPredicted RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 UBLCP1Q8WVY7 318 aaPredicted RBP11.51□□□□□ -0.57
CALD1-210ENST00000443197 CCDC66A2RUB6 948 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 KLRC4O43908 158 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 PALMO75781 387 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 FAM47CQ5HY64 1035 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 DNAAF5Q86Y56 855 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 GLYCTKQ8IVS8 523 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 KRT12Q99456 494 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 JRKLQ9Y4A0 524 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
CALD1-210ENST00000443197 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 SFNP31947 248 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 VAMP7P51809 220 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 CCNA1P78396 465 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 JAG1P78504 1218 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 CFAP58Q5T655 872 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 MMS19Q96T76 1030 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 ATP6V0A4Q9HBG4 840 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 A0A0U1RQJ8 604 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 ADM5C9JUS6 153 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 ZNF185O15231 689 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
CALD1-210ENST00000443197 VPS41P49754 854 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 MFAP3P55082 362 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 GUCY2DQ02846 1103 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 PPP2R5AQ15172 486 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 NFRKBQ6P4R8 1299 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 DLK2Q6UY11 383 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 INTS8Q75QN2 995 aaKnown RBP11.5□□□□□ -0.57
CALD1-210ENST00000443197 UBL4BQ8N7F7 174 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 ATRIPQ8WXE1 791 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 RIT2Q99578 217 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
CALD1-210ENST00000443197 DPH5Q9H2P9 285 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
CALD1-210ENST00000443197 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 SLITRK3O94933 977 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 GGPS1O95749 300 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PGK2P07205 417 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 TMOD1P28289 359 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PDXDC1Q6P996 788 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 SYCE1Q8N0S2 351 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 NEK9Q8TD19 979 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 FAM49AQ9H0Q0 323 aaPredicted RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 CWC15Q9P013 229 aaKnown RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 SEL1LQ9UBV2 794 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 FBXO40Q9UH90 709 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PCDHB4Q9Y5E5 795 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 ITIH6Q6UXX5 1313 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 CAPN2P17655 700 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 OAS2P29728 719 aaKnown RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 OTOP1Q7RTM1 612 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 CCDC26Q8TAB7 109 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 DYDC1Q8WWB3 177 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 MTUS1Q9ULD2 1270 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 ZEB2O60315 1214 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 UCHL3P15374 230 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 ACOT2P49753 483 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 CASP5P51878 434 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 RNF169Q8NCN4 708 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 POLR3CQ9BUI4 534 aaPredicted RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 AP1M1Q9BXS5 423 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 GOLPH3Q9H4A6 298 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PITPNM2Q9BZ72 1349 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 TOGARAM1Q9Y4F4 1720 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 EIF3CLB5ME19 914 aaKnown RBP11.49□□□□□ -0.57
CALD1-210ENST00000443197 H0YCG3 227 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PEX10O60683 326 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 TUBBP07437 444 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 FDX1P10109 184 aa11.49□□□□□ -0.57
CALD1-210ENST00000443197 PTK2Q05397 1052 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms