RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 HSPBP1Q9NZL4 362 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 CLUHO75153 1309 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 NRCAMQ92823 1304 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 ZMYM2Q9UBW7 1377 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 LAMA4Q16363 1823 aa8.63□□□□□ -1.03
SSXP3-201ENST00000442971 TBKBP1A7MCY6 615 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 K7ESF4 209 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 C2CD2LO14523 706 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 CIAO1O76071 339 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 CHRNA1P02708 482 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 ALAS1P13196 640 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 PDE4DQ08499 809 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 UBAP2LQ14157 1087 aaKnown RBP8.62□□□□□ -1.03
SSXP3-201ENST00000442971 MUM1L1Q5H9M0 696 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 GPR155Q7Z3F1 870 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 XAGE2Q96GT9 111 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 TRIM4Q9C037 500 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 SEMA4CQ9C0C4 833 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 CWH43Q9H720 699 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 KANSL2Q9H9L4 492 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
SSXP3-201ENST00000442971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.62□□□□□ -1.03
SSXP3-201ENST00000442971 CACNA1DQ01668 2161 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 DNHD1Q96M86 4753 aa8.62□□□□□ -1.03
SSXP3-201ENST00000442971 SCG2P13521 617 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 CR2P20023 1033 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ELAVL4P26378 380 aaKnown RBP8.61□□□□□ -1.03
SSXP3-201ENST00000442971 HOXC8P31273 242 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 CYP4F3Q08477 520 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 BMS1Q14692 1282 aaKnown RBP8.61□□□□□ -1.03
SSXP3-201ENST00000442971 WTAPQ15007 396 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 LY6KQ17RY6 165 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 CCDC62Q6P9F0 684 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 PRICKLE2Q7Z3G6 844 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 WDR5BQ86VZ2 330 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 FMNL3Q8IVF7 1028 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ZNF687Q8N1G0 1237 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ZNF710Q8N1W2 664 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 GAB3Q8WWW8 586 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 FGF14Q92915 247 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 SRCIN1Q9C0H9 1055 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 TCP11L1Q9NUJ3 509 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 DDX41Q9UJV9 622 aaKnown RBP8.61□□□□□ -1.03
SSXP3-201ENST00000442971 NDRG2Q9UN36 371 aaKnown RBP8.61□□□□□ -1.03
SSXP3-201ENST00000442971 F5P12259 2224 aa8.61□□□□□ -1.03
SSXP3-201ENST00000442971 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.6□□□□□ -1.03
SSXP3-201ENST00000442971 RPP40O75818 363 aaKnown RBP8.6□□□□□ -1.03
SSXP3-201ENST00000442971 CAVIN2O95810 425 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 CFBP00751 764 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 FDX1P10109 184 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 PPM1AP35813 382 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 ALDH7A1P49419 539 aaKnown RBP8.6□□□□□ -1.03
SSXP3-201ENST00000442971 KLRC3Q07444 240 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
SSXP3-201ENST00000442971 PARM1Q6UWI2 310 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 TMEM92Q6UXU6 159 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 PIP4P1Q86T03 277 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 CERS3Q8IU89 383 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 ADAMTS14Q8WXS8 1223 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 WBP1Q96G27 269 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 CCDC17Q96LX7 622 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 LMAN1LQ9HAT1 526 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 FEM1BQ9UK73 627 aa8.6□□□□□ -1.03
SSXP3-201ENST00000442971 PAPSS2O95340 614 aaPredicted RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 NDUFB10O96000 172 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 HOXB1P14653 301 aaPredicted RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 IBSPP21815 317 aaPredicted RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 ADSSP30520 456 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 ZNF76P36508 570 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 IL12RB1P42701 662 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 FAM193AP78312 1265 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 CALD1Q05682 793 aaKnown RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 BAATQ14032 418 aaPredicted RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 KCNT2Q6UVM3 1135 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 PPFIBP1Q86W92 1011 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 SPEM1Q8N4L4 309 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 MIGA1Q8NAN2 632 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 CMASQ8NFW8 434 aaPredicted RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 ZC3H10Q96K80 434 aaKnown RBP8.59□□□□□ -1.03
SSXP3-201ENST00000442971 RNPEPQ9H4A4 650 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 SPG21Q9NZD8 308 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 PCDHB7Q9Y5E2 793 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 ATG2BQ96BY7 2078 aa8.59□□□□□ -1.03
SSXP3-201ENST00000442971 KHNYNO15037 678 aaKnown RBP8.58□□□□□ -1.04
SSXP3-201ENST00000442971 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 CYP7A1P22680 504 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 EDNRBP24530 442 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
SSXP3-201ENST00000442971 HOXA6P31267 233 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 PBX3P40426 434 aa8.58□□□□□ -1.04
SSXP3-201ENST00000442971 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms