RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 TATDN2Q93075 761 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 MKL1Q969V6 931 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 BCS1LQ9Y276 419 aa15.35■□□□□ 0.05
MCF2L-218ENST00000442625 SBF2Q86WG5 1849 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 CTNND1O60716 968 aaKnown RBP15.34■□□□□ 0.05
MCF2L-218ENST00000442625 DRD4P21917 467 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 ELF1P32519 619 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 NOVP48745 357 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 CLK2P49760 499 aaKnown RBP15.34■□□□□ 0.05
MCF2L-218ENST00000442625 KCNA1Q09470 495 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 NEDD9Q14511 834 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 ACCSLQ4AC99 568 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 DPY19L2P1Q6NXN4 242 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 ACTRT1Q8TDG2 376 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 KDM4CQ9H3R0 1056 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 ERVK-5Q9HDB9 667 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 DAGLAQ9Y4D2 1042 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 CLIC2O15247 247 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 GFPT2O94808 682 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 PLCG2P16885 1265 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 PON1P27169 355 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 NF2P35240 595 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 RFC4P35249 363 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 PABPC4Q13310 644 aaKnown RBP eCLIP15.34■□□□□ 0.05
MCF2L-218ENST00000442625 C11orf91Q3C1V1 193 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
MCF2L-218ENST00000442625 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
MCF2L-218ENST00000442625 RPGRQ92834 1020 aaKnown RBP15.34■□□□□ 0.05
MCF2L-218ENST00000442625 CETN3O15182 167 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 SNHG28P0DPA3 235 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 SLCO1A2P46721 670 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 IFNAR2P48551 515 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 SNAP25P60880 206 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 GTF2IP78347 998 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 IFI35P80217 286 aaPredicted RBP15.33■□□□□ 0.05
MCF2L-218ENST00000442625 SHROOM1Q2M3G4 852 aaPredicted RBP15.33■□□□□ 0.05
MCF2L-218ENST00000442625 GKAP1Q5VSY0 366 aaPredicted RBP15.33■□□□□ 0.05
MCF2L-218ENST00000442625 CCT6BQ92526 530 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 PBKQ96KB5 322 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 MXD3Q9BW11 206 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.05
MCF2L-218ENST00000442625 BAIAP2L1Q9UHR4 511 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 GGA1Q9UJY5 639 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 PPP1R9AQ9ULJ8 1098 aa15.33■□□□□ 0.05
MCF2L-218ENST00000442625 IGSF9BQ9UPX0 1349 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 DDX3XO00571 662 aaKnown RBP eCLIP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 TTLL1O95922 423 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 CHN1P15882 459 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 TAL1P17542 331 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 MRPL12P52815 198 aaKnown RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 BIRC3Q13489 604 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 LLGL1Q15334 1064 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 FAM133BQ5BKY9 247 aaKnown RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 HIBCHQ6NVY1 386 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 BARGINQ6ZT62 677 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 C1orf131Q8NDD1 294 aaKnown RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 NT5C3AQ9H0P0 336 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 A1CFQ9NQ94 594 aaKnown RBP15.33■□□□□ 0.04
MCF2L-218ENST00000442625 POLLQ9UGP5 575 aa15.33■□□□□ 0.04
MCF2L-218ENST00000442625 SPDYE3A6NKU9 549 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 GNA14O95837 355 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 PAX7P23759 505 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 PPP2R5AQ15172 486 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 PPP1R7Q15435 360 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 EXOC3L4Q17RC7 722 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 CCDC38Q502W7 563 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 DCAF12L1Q5VU92 463 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 SLC30A10Q6XR72 485 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 ATP8B4Q8TF62 1192 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 TCP11Q8WWU5 503 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 SNX24Q9Y343 169 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 SFI1A8K8P3 1242 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 RSPH10B2B2RC85 870 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 HGSO14964 777 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-218ENST00000442625 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 ZBTB5O15062 677 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 BUB1BO60566 1050 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-218ENST00000442625 AKAP3O75969 853 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 RSPH10BP0C881 870 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 HOXD13P35453 343 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 PLTPP55058 493 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 SEPT2Q15019 361 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 NT5DC3Q86UY8 548 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 SFR1Q86XK3 245 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 GLYCTKQ8IVS8 523 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 ATL2Q8NHH9 583 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 XPO6Q96QU8 1125 aaKnown RBP15.32■□□□□ 0.04
MCF2L-218ENST00000442625 KDM3AQ9Y4C1 1321 aa15.32■□□□□ 0.04
MCF2L-218ENST00000442625 FAM196BA6NMK8 535 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 FOXO6A8MYZ6 492 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 IL1R1P14778 569 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 GALCP54803 685 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 MARSP56192 900 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 SARNPP82979 210 aaKnown RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 GABPAQ06546 454 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 PLCB4Q15147 1175 aa15.31■□□□□ 0.04
MCF2L-218ENST00000442625 ACTR5Q9H9F9 607 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-218ENST00000442625 TMOD4Q9NZQ9 345 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms