RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
PMS1-213ENST00000441310 MSH2P43246 934 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 PDE4DQ08499 809 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 NAALADL2Q58DX5 795 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 CERS5Q8N5B7 392 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.23■□□□□ 0.51
PMS1-213ENST00000441310 EPAS1Q99814 870 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 CCDC113Q9H0I3 377 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 DBNDD1Q9H9R9 158 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 GOPCQ9HD26 462 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 SIK3Q9Y2K2 1263 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 FCER1AP12319 257 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 SLC17A8Q8NDX2 589 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 TLCD1Q96CP7 247 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 CEP95Q96GE4 821 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 DHTKD1Q96HY7 919 aaPredicted RBP18.23■□□□□ 0.51
PMS1-213ENST00000441310 PACSIN1Q9BY11 444 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 C2CD2Q9Y426 696 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 KLRF2D3W0D1 207 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 STK4Q13043 487 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 ANO7Q6IWH7 933 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
PMS1-213ENST00000441310 ATXN2LQ8WWM7 1075 aaKnown RBP18.23■□□□□ 0.51
PMS1-213ENST00000441310 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 CELF4Q9BZC1 486 aaKnown RBP18.23■□□□□ 0.51
PMS1-213ENST00000441310 PNMA3Q9UL41 463 aa18.23■□□□□ 0.51
PMS1-213ENST00000441310 RHOBTB3O94955 611 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 CACNB3P54284 484 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 MYH1P12882 1939 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 BICDL2A1A5D9 508 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 RAD21O60216 631 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 USP4Q13107 963 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 RPS6KA1Q15418 735 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 VWA3BQ502W6 1294 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 BLIDQ8IZY5 108 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 CENPTQ96BT3 561 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 PCDHAC2Q9Y5I4 1007 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 RPS6KL1Q9Y6S9 549 aa18.22■□□□□ 0.51
PMS1-213ENST00000441310 FRMPD2Q68DX3 1309 aaPredicted RBP18.22■□□□□ 0.51
PMS1-213ENST00000441310 GOLGA6L10A0A0M3HER8 536 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 LGR5O75473 907 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 INF2Q27J81 1249 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 KIAA0753Q2KHM9 967 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 ASTE1Q2TB18 679 aaPredicted RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 DPP8Q6V1X1 898 aaPredicted RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 C15orf52Q6ZUT6 534 aaKnown RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 LRRC47Q8N1G4 583 aaKnown RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 UHMK1Q8TAS1 419 aaKnown RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 UBR3Q6ZT12 1888 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 TTI1O43156 1089 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 ITGA4P13612 1032 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 GCLCP48506 637 aaPredicted RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 NAB2Q15742 525 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 BAP1Q92560 729 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 TANGO6Q9C0B7 1094 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 RGL1Q9NZL6 768 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 POLE2P56282 527 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 COPS2P61201 443 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 IFI35P80217 286 aaPredicted RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 GRM4Q14833 912 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 PDXDC1Q6P996 788 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 SP8Q8IXZ3 490 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 GALNT15Q8N3T1 639 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 TBC1D5Q92609 795 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
PMS1-213ENST00000441310 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
PMS1-213ENST00000441310 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
PMS1-213ENST00000441310 SYT15Q9BQS2 421 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 NSRP1Q9H0G5 558 aaKnown RBP18.2■□□□□ 0.5
PMS1-213ENST00000441310 AZI2Q9H6S1 392 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 NKX1-2Q9UD57 310 aaPredicted RBP18.2■□□□□ 0.5
PMS1-213ENST00000441310 CCDC194A0A1B0GVG4 234 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 KRIT1O00522 736 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 HIP1RO75146 1068 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 HGSNATQ68CP4 663 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 TRIM74Q86UV6 250 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 TRIM73Q86UV7 250 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 TRIM4Q9C037 500 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 LMCD1Q9NZU5 365 aa18.2■□□□□ 0.5
PMS1-213ENST00000441310 FAM196BA6NMK8 535 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 RNF8O76064 485 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 UBA7P41226 1012 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 ASIC1P78348 528 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 SEPT2Q15019 361 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 DNAAF5Q86Y56 855 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 LMNTD2Q8IXW0 634 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 NLGN1Q8N2Q7 840 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 TEX9Q8N6V9 391 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 MGARPQ8TDB4 240 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 ADAM7Q9H2U9 754 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 USP17L5A8MUK1 530 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 TCP10Q12799 353 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 C16orf86Q6ZW13 317 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 HOOK3Q86VS8 718 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 SCFD2Q8WU76 684 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 RAB17Q9H0T7 212 aa18.19■□□□□ 0.5
PMS1-213ENST00000441310 USP40Q9NVE5 1235 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms