RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 GTF2F1P35269 517 aaKnown RBP eCLIP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 GATMP50440 423 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 CCT2P78371 535 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 FAM189BP81408 668 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 DLX2Q07687 328 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 MAP7D2Q96T17 732 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 RIT2Q99578 217 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 OSMRQ99650 979 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 UPF3BQ9BZI7 483 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 DISC1Q9NRI5 854 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
UBE2D4-204ENST00000440899 TRIOO75962 3097 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 PRR33A8MZF0 331 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 MSH4O15457 936 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 MBTPS2O43462 519 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 EPB41L2O43491 1005 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 DCXO43602 365 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 GAS7O60861 476 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 CLCN3P51790 818 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 NLRP5P59047 1200 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 UBE3AQ05086 875 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 SMAD4Q13485 552 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 CLUL1Q15846 466 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 SPOUT1Q5T280 376 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 FAM228AQ86W67 206 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 EFHBQ8N7U6 833 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 PPP1R16BQ96T49 567 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 POP1Q99575 1024 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 C22orf23Q9BZE7 217 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 AKT3Q9Y243 479 aa13.14□□□□□ -0.31
UBE2D4-204ENST00000440899 LINC01565O15544 149 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 EDIL3O43854 480 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 ZNF862O60290 1169 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 TBX10O75333 385 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 OATP04181 439 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 EIF4BP23588 611 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 SFNP31947 248 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 IRS1P35568 1242 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 NDUFV1P49821 464 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 JAK3P52333 1124 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 NLRP11P59045 1033 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 PRKCEQ02156 737 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 DSC3Q14574 896 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 LINC01465Q8N7H1 131 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 TBCKQ8TEA7 893 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 SLC5A5Q92911 643 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 MSLNLQ96KJ4 702 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 ZSWIM6Q9HCJ5 1215 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 TYW1Q9NV66 732 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
UBE2D4-204ENST00000440899 EVPLQ92817 2033 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 CPLX1O14810 134 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 HOXA2O43364 376 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 EYA4O95677 639 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 NRIP1P48552 1158 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 Q4G0T1 1027 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 LRCH2Q5VUJ6 765 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 FAM177A1Q8N128 213 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 MICAL1Q8TDZ2 1067 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 TEKT3Q9BXF9 490 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 ADAMTS10Q9H324 1103 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 TLE6Q9H808 572 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
UBE2D4-204ENST00000440899 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CYP3A7-CYP3A51PA0A087WV96 503 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CHMP2AO43633 222 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 PSMD10O75832 226 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 FGF18O76093 207 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 DEXIO95424 95 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 FGFR1P11362 822 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 LAG3P18627 525 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CYP3A7P24462 503 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 PDE12Q6L8Q7 609 aaKnown RBP13.11□□□□□ -0.31
UBE2D4-204ENST00000440899 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms