RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 C1orf186Q6ZWK4 172 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 TADA2BQ86TJ2 420 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 KCTD17Q8N5Z5 321 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 SYT17Q9BSW7 474 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 AGO4Q9HCK5 861 aaKnown RBP15.5■□□□□ 0.07
LIMD1-202ENST00000440097 PXMP2Q9NR77 195 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 SIK3Q9Y2K2 1263 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 REXO2Q9Y3B8 237 aaKnown RBP15.5■□□□□ 0.07
LIMD1-202ENST00000440097 RPTORQ8N122 1335 aa15.5■□□□□ 0.07
LIMD1-202ENST00000440097 BCRP11274 1271 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 FOXR2Q6PJQ5 311 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 GDAP1L1Q96MZ0 367 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 PDCD2LQ9BRP1 358 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 MYO1AQ9UBC5 1043 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 ARMCX3Q9UH62 379 aaPredicted RBP15.49■□□□□ 0.07
LIMD1-202ENST00000440097 SP4Q02446 784 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 MAP3K20Q9NYL2 800 aaKnown RBP15.49■□□□□ 0.07
LIMD1-202ENST00000440097 PCDHB13Q9Y5F0 798 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 UBIAD1Q9Y5Z9 338 aa15.49■□□□□ 0.07
LIMD1-202ENST00000440097 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 A0A1W2PQJ5 194 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 P4HBP07237 508 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 RPL13P26373 211 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 FIGNQ5HY92 759 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 DCPSQ96C86 337 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 IQCDQ96DY2 449 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 LSM14BQ9BX40 385 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 HDAC6Q9UBN7 1215 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 ZC3H4Q9UPT8 1303 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 DOCK1Q14185 1865 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 A0A087WUV0 522 aaPredicted RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 PDXKO00764 312 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 ENC1O14682 589 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 NR3C1P04150 777 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 DSG3P32926 999 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 HOXD13P35453 343 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 KRT83P78385 493 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 CYP27A1Q02318 531 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 SPA17Q15506 151 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 CCDC122Q5T0U0 273 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 TRIM59Q8IWR1 403 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 IKZF4Q9H2S9 585 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 TBC1D22BQ9NU19 505 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 TYW1Q9NV66 732 aaKnown RBP15.48■□□□□ 0.07
LIMD1-202ENST00000440097 PPP2R3BQ9Y5P8 575 aa15.48■□□□□ 0.07
LIMD1-202ENST00000440097 PLEKP08567 350 aaPredicted RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 YBX3P16989 372 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■□□□□ 8.1
LIMD1-202ENST00000440097 KCNH2Q12809 1159 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 MEA1Q16626 185 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 TDRD12Q587J7 1177 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 PADI6Q6TGC4 694 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 STXBP4Q6ZWJ1 553 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 SYCP3Q8IZU3 236 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 NCAPGQ9BPX3 1015 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 TEX13BQ9BXU2 312 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 TRAF3IP3Q9Y228 551 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 FRMPD4Q14CM0 1322 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 DHX15O43143 795 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 SORBS3O60504 671 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 USO1O60763 962 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ATP9AO75110 1047 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 EPB41P11171 864 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 GGCXP38435 758 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 QARSP47897 775 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 POLR2FP61218 127 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ENOX2Q16206 610 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 MMS22LQ6ZRQ5 1243 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 TRAPPC11Q7Z392 1133 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 SUGP1Q8IWZ8 645 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 MMS19Q96T76 1030 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 FAM184BQ9ULE4 1060 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 CSADQ9Y600 493 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 BRCA2P51587 3418 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ADM5C9JUS6 153 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 AKR1B10O60218 316 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 HIP1RO75146 1068 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ZMYND10O75800 440 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 NR3C2P08235 984 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 MUTP22033 750 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 CCND2P30279 289 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 ARID5AQ03989 594 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 VGLL4Q14135 290 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 MAP9Q49MG5 647 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 NLRX1Q86UT6 975 aa15.47■□□□□ 0.07
LIMD1-202ENST00000440097 GSPT2Q8IYD1 628 aaKnown RBP15.47■□□□□ 0.07
LIMD1-202ENST00000440097 COG1Q8WTW3 980 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms