RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 MICALL1Q8N3F8 863 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 CSRNP1Q96S65 589 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 DPH5Q9H2P9 285 aa14.78□□□□□ -0.04
HERPUD1-204ENST00000439977 TISP43B9A030 160 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 DAPK3O43293 454 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 NPR1P16066 1061 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 LRCH2Q5VUJ6 765 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 PALB2Q86YC2 1186 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 BANK1Q8NDB2 785 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 FAM20AQ96MK3 541 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 FAM169AQ9Y6X4 670 aa14.77□□□□□ -0.04
HERPUD1-204ENST00000439977 SHTN1A0MZ66 631 aa14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 MAGEA9P43362 315 aa14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 COL23A1Q86Y22 540 aaPredicted RBP14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 PRMT6Q96LA8 375 aaPredicted RBP14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 TAF1DQ9H5J8 278 aaPredicted RBP14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 TAS2R14Q9NYV8 317 aa14.77□□□□□ -0.05
HERPUD1-204ENST00000439977 CLRN2A0PK11 232 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TCP10L2B9ZVM9 353 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TTI1O43156 1089 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 ECE2O60344 883 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 EYA4O95677 639 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TNFRSF8P28908 595 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 DRAP1Q14919 205 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 RBM26Q5T8P6 1007 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TATDN1Q6P1N9 297 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 OTOP1Q7RTM1 612 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 RUBCNQ92622 972 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 DNAJC12Q9UKB3 198 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TAF1LQ8IZX4 1826 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 IGSF9BQ9UPX0 1349 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 BACH1O14867 736 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 BUB1BO60566 1050 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 ECHS1P30084 290 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 STAT1P42224 750 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 AOC3Q16853 763 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 DACT2Q5SW24 774 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 UBLCP1Q8WVY7 318 aaPredicted RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 HSD17B14Q9BPX1 270 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 PPP1R9AQ9ULJ8 1098 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 SCAF8Q9UPN6 1271 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 BZW2Q9Y6E2 419 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 IGLV3-22A0A075B6J6 115 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 PGRMC1O00264 195 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 TBX3O15119 743 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 NR1D1P20393 614 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 ALDH1B1P30837 517 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 HSD17B3P37058 310 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 ODR4Q5SWX8 454 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 MOXD1Q6UVY6 613 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 PODNQ7Z5L7 613 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 VPS36Q86VN1 386 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 SLC35G2Q8TBE7 412 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 HOOK2Q96ED9 719 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 METTL14Q9HCE5 456 aaKnown RBP14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 LRRC4CQ9HCJ2 640 aa14.76□□□□□ -0.05
HERPUD1-204ENST00000439977 FOSP01100 380 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 FGGP02679 453 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 PSMC2P35998 433 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 JAM2P57087 298 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 AADACL2Q6P093 401 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 FAM178BQ8IXR5 827 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.75□□□□□ -0.057e-9■■□□□ 13.7
HERPUD1-204ENST00000439977 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 ZMYM2Q9UBW7 1377 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 ARP10275 920 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 HOXA7P31268 230 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 LLGL1Q15334 1064 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 UAP1Q16222 522 aaPredicted RBP14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 C1orf186Q6ZWK4 172 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 TRIM51Q9BSJ1 452 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 PARVGQ9HBI0 331 aa14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 PPANQ9NQ55 473 aaKnown RBP14.75□□□□□ -0.05
HERPUD1-204ENST00000439977 F8VZ95 297 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 GAS7O60861 476 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 LSP1P33241 339 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 CTNNA1P35221 906 aaKnown RBP14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 NT5DC3Q86UY8 548 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 SYCP3Q8IZU3 236 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 ELMO3Q96BJ8 720 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 ARHGEF26Q96DR7 871 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 ISCUQ9H1K1 167 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 FBXO28Q9NVF7 368 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 ARFGEF1Q9Y6D6 1849 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 CHRNA5P30532 468 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 PRKCIP41743 596 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 FMO5P49326 533 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 STAT2P52630 851 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 DLG4P78352 724 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 IFI16Q16666 785 aaKnown RBP14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 TTC31Q49AM3 519 aaPredicted RBP14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 CDAN1Q8IWY9 1227 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 WHAMMQ8TF30 809 aa14.74□□□□□ -0.05
HERPUD1-204ENST00000439977 BORCS6Q96GS4 357 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms