RNA–Protein interactions for RNA: ENST00000439732.6

SMARCA2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 3

Gene SMARCA2, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-213	ENST00000439732	CDK5RAP3	Q96JB5	506 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CELF4	Q9BZC1	486 aa	Known RBP	10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	NT5C3A	Q9H0P0	336 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	DHX33	Q9H6R0	707 aa	Known RBP	10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	KIAA1024	Q9UPX6	916 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	AKT3	Q9Y243	479 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SRPRB	Q9Y5M8	271 aa	Known RBP	10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TRPV2	Q9Y5S1	764 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CDY2A	Q9Y6F7	541 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SCN5A	Q14524	2016 aa		10.62	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ARHGEF35	A5YM69	484 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZBTB39	O15060	712 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	NBN	O60934	754 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	BAIAP3	O94812	1187 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	YEATS4	O95619	227 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	BRD1	O95696	1058 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CRYBB1	P53674	252 aa	Predicted RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	EPHB4	P54760	987 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SHH	Q15465	462 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PLA2G4F	Q68DD2	849 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	FAM173B	Q6P4H8	233 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CNKSR3	Q6P9H4	555 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LINC01465	Q8N7H1	131 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	KRI1	Q8N9T8	703 aa	Known RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MCPH1	Q8NEM0	835 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PIGO	Q8TEQ8	1089 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZBTB10	Q96DT7	871 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CALML4	Q96GE6	196 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RNPC3	Q96LT9	517 aa	Known RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	USP28	Q96RU2	1077 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CEP89	Q96ST8	783 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	DDX19A	Q9NUU7	478 aa	Known RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SUCLA2	Q9P2R7	463 aa	Predicted RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TFIP11	Q9UBB9	837 aa	Known RBP	10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SLC4A7	Q9Y6M7	1214 aa		10.61	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TMEM150B	A6NC51	233 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SPTLC2	O15270	562 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	EYA4	O95677	639 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MARCKS	P29966	332 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TXLNA	P40222	546 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	KCNJ6	P48051	423 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RARRES1	P49788	294 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CLCN3	P51790	818 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	NLRP11	P59045	1033 aa	Known RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MGAT3	Q09327	533 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MXD4	Q14582	209 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	GPNMB	Q14956	572 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	EMC2	Q15006	297 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZRSR1	Q15695	479 aa	Known RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PLEKHG4	Q58EX7	1191 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	FBXO47	Q5MNV8	452 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	C9orf50	Q5SZB4	431 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	HYI	Q5T013	277 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	POTEG	Q6S5H5	508 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TSHZ1	Q6ZSZ6	1077 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	OTOP2	Q7RTS6	562 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CABP7	Q86V35	215 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LRRC71	Q8N4P6	559 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LINC00301	Q8NCQ3	95 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	KCNG4	Q8TDN1	519 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PSPC1	Q8WXF1	523 aa	Known RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	SCLT1	Q96NL6	688 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MTR	Q99707	1265 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	IFIH1	Q9BYX4	1025 aa	Known RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	INO80B	Q9C086	356 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ATP6V0A4	Q9HBG4	840 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RNF216	Q9NWF9	866 aa	Predicted RBP	10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LOXHD1	Q8IVV2	1947 aa		10.6	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MYO9B	Q13459	2157 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PP2D1	A8MPX8	630 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZBBX	A8MT70	800 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	GPR182	O15218	404 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PPP6R2	O75170	966 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	GPR32	O75388	356 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RPS6KA5	O75582	802 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	VTN	P04004	478 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	CDC25A	P30304	524 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TMEM62	Q0P6H9	643 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PAK2	Q13177	524 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PKP1	Q13835	747 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	TFDP1	Q14186	410 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LPIN1	Q14693	890 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	MBTPS1	Q14703	1052 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ECM1	Q16610	540 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	KIZ	Q2M2Z5	673 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	LRIT3	Q3SXY7	679 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	HABP4	Q5JVS0	413 aa	Known RBP	10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RASIP1	Q5U651	963 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PADI6	Q6TGC4	694 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZNF410	Q86VK4	478 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	ZNF579	Q8NAF0	562 aa	Known RBP	10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	DBF4B	Q8NFT6	615 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	RASSF8	Q8NHQ8	419 aa		10.59	□□□□□ -0.71
SMARCA2-213	ENST00000439732	PHOSPHO2	Q8TCD6	241 aa		10.59	□□□□□ -0.71

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