RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 EHHADHQ08426 723 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 MAPK7Q13164 816 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 KCNB1Q14721 858 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 KLHL10Q6JEL2 608 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 TRIML1Q8N9V2 468 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 C16orf70Q9BSU1 422 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 ANKEF1Q9NU02 776 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 RMND1Q9NWS8 449 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 TRPC6Q9Y210 931 aa11.09□□□□□ -0.63
CBX5-202ENST00000439541 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 DKC1O60832 514 aaKnown RBP eCLIP11.08□□□□□ -0.64
CBX5-202ENST00000439541 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
CBX5-202ENST00000439541 ZNF165P49910 485 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 CASP5P51878 434 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 LRRC41Q15345 812 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
CBX5-202ENST00000439541 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 AOPEPQ8N6M6 819 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 SH3TC2Q8TF17 1288 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 CEP89Q96ST8 783 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 RNPEPQ9H4A4 650 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 XPNPEP1Q9NQW7 623 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 CTNND2Q9UQB3 1225 aa11.08□□□□□ -0.64
CBX5-202ENST00000439541 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
CBX5-202ENST00000439541 PVALEFA0A1B0GWK0 134 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 A6NJR5 290 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 ZBTB42B2RXF5 422 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 SEPT4O43236 478 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 FAM13AO94988 1023 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 MYCP01106 439 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 GNRH1P01148 92 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 MYCNP04198 464 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 C6orf222P0C671 652 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 GUCY2CP25092 1073 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 CDC25BP30305 580 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 PRCPP42785 496 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 STX17P56962 302 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 EMC2Q15006 297 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 FSCN1Q16658 493 aaKnown RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 DGKDQ16760 1214 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 FAM102BQ5T8I3 360 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 OTUD6AQ7L8S5 288 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 PLPPR4Q7Z2D5 763 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 DHX40Q8IX18 779 aaKnown RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 CCDC65Q8IXS2 484 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 MED15Q96RN5 788 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 SMARCAD1Q9H4L7 1026 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 RBAK-RBAKDNI3L0D1 243 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 AP5Z1O43299 807 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 MYL3P08590 195 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 MYBP10242 640 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 GRK4P32298 578 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 POLGP54098 1239 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 IGBP1P78318 339 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 DRP2Q13474 957 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 BBXQ8WY36 941 aaPredicted RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 BSNDQ8WZ55 320 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 CCDC47Q96A33 483 aaKnown RBP11.07□□□□□ -0.64
CBX5-202ENST00000439541 TMEM143Q96AN5 459 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 FAM167AQ96KS9 214 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 KIFC3Q9BVG8 833 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 TRIM5Q9C035 493 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 AP5M1Q9H0R1 490 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 ERAP1Q9NZ08 941 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 PCDHA2Q9Y5H9 948 aa11.07□□□□□ -0.64
CBX5-202ENST00000439541 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 GOLGA6L19H0YKK7 550 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 H3BRB1 525 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 F2P00734 622 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 ATXN8OSP0DMR3 200 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 RARBP10826 455 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 NMT1P30419 496 aaKnown RBP11.06□□□□□ -0.64
CBX5-202ENST00000439541 ZNF131P52739 623 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
CBX5-202ENST00000439541 IQCB1Q15051 598 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 MYCT1Q8N699 235 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 MLKLQ8NB16 471 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 SPC24Q8NBT2 197 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 KAT2BQ92831 832 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
CBX5-202ENST00000439541 IKZF4Q9H2S9 585 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 KCNF1Q9H3M0 494 aa11.06□□□□□ -0.64
CBX5-202ENST00000439541 TUT1Q9H6E5 874 aaKnown RBP11.06□□□□□ -0.64
CBX5-202ENST00000439541 ATP6V0A4Q9HBG4 840 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms