RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 SCTRP47872 440 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 TUBB4BP68371 445 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SARNPP82979 210 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZC2HC1CQ53FD0 456 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 MIIPQ5JXC2 388 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 UBAP2Q5T6F2 1119 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 FUKQ8N0W3 1084 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZNF507Q8TCN5 953 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 PRMT1Q99873 361 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYBP10242 640 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 CASP5P51878 434 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 CCNHP51946 323 aaPredicted RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SNX1Q13596 522 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 COA1Q9GZY4 146 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 AZI2Q9H6S1 392 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 LUC7LQ9NQ29 371 aaKnown RBP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SERPINA10Q9UK55 444 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 CAND2O75155 1236 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 GFPT2O94808 682 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 FGGP02679 453 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 ALS2CLQ60I27 953 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 HAS1Q92839 578 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SH3GL2Q99962 352 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
CDC42SE1-202ENST00000439374 SPEF2Q9C093 1822 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 A0A1W2PQC6 194 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 CLGNO14967 610 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 PRPHP41219 470 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 CASP4P49662 377 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNJ2P63252 427 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 IFI35P80217 286 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 PRKG1Q13976 671 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 AMNQ9BXJ7 453 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 FBXO28Q9NVF7 368 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 STK17AQ9UEE5 414 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 CICQ96RK0 1608 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYH6P13533 1939 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 EME2A4GXA9 379 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 FAM107AO95990 144 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYCLP12524 364 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 XRCC5P13010 732 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 GPATCH4Q5T3I0 446 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZNF746Q6NUN9 644 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 ZNF449Q6P9G9 518 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 KRT27Q7Z3Y8 459 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 ACER1Q8TDN7 264 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 MIEF2Q96C03 454 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 NOD2Q9HC29 1040 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 SAMD15Q9P1V8 674 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 HDAC9Q9UKV0 1011 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 G3BP2Q9UN86 482 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 NR2E1Q9Y466 385 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 ITGB4P16144 1822 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 H0YIN7 160 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 AP1G2O75843 785 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 NDUFB10O96000 172 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 TRIM49P0CI25 452 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 TRIM49CP0CI26 452 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 CHN1P15882 459 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 HSPA1LP34931 641 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 CATSPER3Q86XQ3 398 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 GUF1Q8N442 669 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 LRRC27Q9C0I9 530 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 RIOX1Q9H6W3 641 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 RIC8AQ9NPQ8 531 aa10.78□□□□□ -0.68
CDC42SE1-202ENST00000439374 MYH7P12883 1935 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 EVI5O60447 810 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 SHOX2O60902 331 aaPredicted RBP10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 PIAS1O75925 651 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 KCNJ1P48048 391 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 FNTAP49354 379 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 ISLR2Q6UXK2 745 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 MMGT1Q8N4V1 131 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 ARFGAP2Q8N6H7 521 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 ABCF3Q9NUQ8 709 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 PI4KBQ9UBF8 816 aa10.77□□□□□ -0.68
CDC42SE1-202ENST00000439374 ANO9A1A5B4 782 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 M0R2N6 131 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 ECE2O60344 883 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 BMP3P12645 472 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 PPP2R2AP63151 447 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 ZNF844Q08AG5 666 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 EXOC3L4Q17RC7 722 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 CENPPQ6IPU0 288 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 APOBEC3HQ6NTF7 200 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 COL23A1Q86Y22 540 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 LRRC34Q8IZ02 419 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 PRMT6Q96LA8 375 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 REEP2Q9BRK0 252 aa10.77□□□□□ -0.69
CDC42SE1-202ENST00000439374 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms