RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 SH3TC2Q8TF17 1288 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 ZWILCHQ9H900 591 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 BRD1O95696 1058 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 DCAF4L1Q3SXM0 396 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 SEPT5Q99719 369 aaPredicted RBP13.04□□□□□ -0.32
NEK1-201ENST00000439128 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 PIK3C2BO00750 1634 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 ADM5C9JUS6 153 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 MAN2A1Q16706 1144 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 NAA35Q5VZE5 725 aa13.04□□□□□ -0.32
NEK1-201ENST00000439128 CROCC2H7BZ55 1655 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 POTEIP0CG38 1075 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 YWHABP31946 246 aaKnown RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PAN2Q504Q3 1202 aaKnown RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 POTEGQ6S5H5 508 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 DEFB128Q7Z7B8 93 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 TICAM2Q86XR7 235 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PRR12Q9ULL5 1215 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 SRGNP10124 158 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 FAM133AQ8N9E0 248 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 BARHL2Q9NY43 387 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 PCDHA5Q9Y5H7 936 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 M0QYV0 167 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PDHXO00330 501 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PMLP29590 882 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 ALDH7A1P49419 539 aaKnown RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 KIAA1755Q5JYT7 1200 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 SPATA24Q86W54 205 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 GPC2Q8N158 579 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 SPON2Q9BUD6 331 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PTPN22Q9Y2R2 807 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 NR2E3Q9Y5X4 410 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 ORC4O43929 436 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PSMA2P25787 234 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 PSMD6Q15008 389 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 CEP55Q53EZ4 464 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 NBPF12Q5TAG4 269 aaPredicted RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 TMEM143Q96AN5 459 aa13.03□□□□□ -0.32
NEK1-201ENST00000439128 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
NEK1-201ENST00000439128 APOEP02649 317 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 MYL1P05976 194 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 PPARGP37231 505 aaPredicted RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 ST8SIA6P61647 398 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 BFSP2Q13515 415 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 KYAT1Q16773 422 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 ARL6IP4Q66PJ3 421 aaKnown RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 GIMAP7Q8NHV1 300 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 PRIMPOLQ96LW4 560 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 QRICH2Q9H0J4 1663 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 BUB1BO60566 1050 aaPredicted RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 SLFN14P0C7P3 912 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 EVCP57679 992 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 LLGL1Q15334 1064 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 TMTC4Q5T4D3 741 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 DENND2CQ68D51 928 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 RAB44Q7Z6P3 723 aaPredicted RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.32
NEK1-201ENST00000439128 SAAL1Q96ER3 474 aa13.02□□□□□ -0.32
NEK1-201ENST00000439128 LRRD1A4D1F6 860 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 RAG1P15918 1043 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 SATB1Q01826 763 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 SDE2Q6IQ49 451 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 AGBL1Q96MI9 1066 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 RNF208Q9H0X6 261 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 PPP2R3BQ9Y5P8 575 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 PQBP1O60828 265 aaKnown RBP13.02□□□□□ -0.33
NEK1-201ENST00000439128 IRF1P10914 325 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 IGFBP4P22692 258 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 NME3Q13232 169 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 LAMC2Q13753 1193 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 TDRD7Q8NHU6 1098 aaKnown RBP13.02□□□□□ -0.33
NEK1-201ENST00000439128 EIF3CLB5ME19 914 aaKnown RBP13.02□□□□□ -0.33
NEK1-201ENST00000439128 DYNC1I1O14576 645 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 CIB2O75838 187 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 TDP2O95551 362 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 EFNA5P52803 228 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 MAP7Q14244 749 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 TMEM270Q6UE05 265 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 PASD1Q8IV76 773 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 IFT43Q96FT9 208 aa13.02□□□□□ -0.33
NEK1-201ENST00000439128 EIF3CQ99613 913 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms