RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SEL1LQ9UBV2 794 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 FBXL5Q9UKA1 691 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 FRMD4BQ9Y2L6 1034 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 UTRNP46939 3433 aa13.25□□□□□ -0.29
HDAC8-214ENST00000439122 ARHGEF35A5YM69 484 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 GOLGA6BA6NDN3 693 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 TBC1D12O60347 775 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 CAPN2P17655 700 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 PRKCIP41743 596 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 JAM2P57087 298 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 EN1Q05925 392 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-214ENST00000439122 GOLGA6L1Q8N7Z2 621 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 FIZ1Q96SL8 496 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 PSMD1Q99460 953 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
HDAC8-214ENST00000439122 PSME4Q14997 1843 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ZC3H4Q9UPT8 1303 aaKnown RBP13.24□□□□□ -0.29
HDAC8-214ENST00000439122 GFPT2O94808 682 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ASNSP08243 561 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ITGB5P18084 799 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 MUTP22033 750 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 RXRBP28702 533 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ZNF131P52739 623 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 PLS1Q14651 629 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 SYCP3Q8IZU3 236 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 TAF4BQ92750 862 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ZNF341Q9BYN7 854 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-214ENST00000439122 GOLPH3Q9H4A6 298 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 AGPAT3Q9NRZ7 376 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 KCND2Q9NZV8 630 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 ODF2LQ9ULJ1 636 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 KIF13BQ9NQT8 1826 aa13.24□□□□□ -0.29
HDAC8-214ENST00000439122 BTNL10A8MVZ5 291 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 KCNK3O14649 394 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 INPP5BP32019 993 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 FMO5P49326 533 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 RPS6KA1Q15418 735 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 IFI16Q16666 785 aaKnown RBP13.23□□□□□ -0.29
HDAC8-214ENST00000439122 PTPROQ16827 1216 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 GLE1Q53GS7 698 aaKnown RBP13.23□□□□□ -0.29
HDAC8-214ENST00000439122 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 PLEKHA4Q9H4M7 779 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 UBE4BO95155 1302 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 NFIBO00712 420 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 HIP1RO75146 1068 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 ICAM1P05362 532 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 STAT1P42224 750 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 EPHB4P54760 987 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 NFIL3Q16649 462 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 ZSCAN26Q16670 478 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 MIER3Q7Z3K6 550 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 RDH13Q8NBN7 331 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 HOOK2Q96ED9 719 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 RIT2Q99578 217 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 COL20A1Q9P218 1284 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 SAMM50Q9Y512 469 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 MYH11P35749 1972 aa13.23□□□□□ -0.29
HDAC8-214ENST00000439122 COL4A5P29400 1685 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 RBBP6Q7Z6E9 1792 aaKnown RBP13.22□□□□□ -0.29
HDAC8-214ENST00000439122 AGPSO00116 658 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 EVI5O60447 810 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 EXOC3O60645 756 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 GLI1P08151 1106 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 FERP16591 822 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 GUCY2CP25092 1073 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 PTGER2P43116 358 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 B3GNT9Q6UX72 402 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 IFT20Q8IY31 132 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 U2AF1L4Q8WU68 220 aaKnown RBP13.22□□□□□ -0.29
HDAC8-214ENST00000439122 INPP4AQ96PE3 977 aaPredicted RBP13.22□□□□□ -0.29
HDAC8-214ENST00000439122 KRT12Q99456 494 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 K7ENM7 598 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC8-214ENST00000439122 HEXIM1O94992 359 aaKnown RBP13.22□□□□□ -0.29
HDAC8-214ENST00000439122 H2AFZP0C0S5 128 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 ANXA13P27216 316 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 HSD17B4P51659 736 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 TNIP1Q15025 636 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 EMBQ6PCB8 327 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 PADI6Q6TGC4 694 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 H2AFVQ71UI9 128 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 NIM1KQ8IY84 436 aa13.22□□□□□ -0.29
HDAC8-214ENST00000439122 IL31RAQ8NI17 732 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms