RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 GPR152Q8TDT2 470 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 SLC22A17Q8WUG5 538 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 ZSCAN10Q96SZ4 725 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-208ENST00000439029 PCYT2Q99447 389 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 SMARCAD1Q9H4L7 1026 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 C1orf112Q9NSG2 853 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 DZANK1Q9NVP4 752 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 DLGAP2Q9P1A6 1054 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 PCDHA2Q9Y5H9 948 aa11.22□□□□□ -0.61
SMPD4-208ENST00000439029 DENND4AQ7Z401 1863 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 B4E1Z4 1266 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 N4BP1O75113 896 aaKnown RBP11.21□□□□□ -0.61
SMPD4-208ENST00000439029 PPM1AP35813 382 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 LMNB2Q03252 620 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 GPR149Q86SP6 731 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 VPS52Q8N1B4 723 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 SLC44A3Q8N4M1 653 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 MTMR8Q96EF0 704 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 SENP7Q9BQF6 1050 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 RTKNQ9BST9 563 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.61
SMPD4-208ENST00000439029 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-208ENST00000439029 CNOT1A5YKK6 2376 aaKnown RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 TTC41PQ6P2S7 1318 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 PRR5-ARHGAP8B1AHC4 643 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 STAM2O75886 525 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 KCNA2P16389 499 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 ARHGAP8P85298 464 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 CSTF1Q05048 431 aaKnown RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 ACAP1Q15027 740 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 USP17L6PQ6QN14 398 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 MTHFD1LQ6UB35 978 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 NLRX1Q86UT6 975 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 TMEM173Q86WV6 379 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 IQCA1Q86XH1 822 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 ABI1Q8IZP0 508 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 OSMRQ99650 979 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 DCTPP1Q9H773 170 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 ARHGEF3Q9NR81 526 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 HELLSQ9NRZ9 838 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 SPATA6Q9NWH7 488 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 SMG5Q9UPR3 1016 aaKnown RBP11.2□□□□□ -0.62
SMPD4-208ENST00000439029 COL4A3Q01955 1670 aa11.2□□□□□ -0.62
SMPD4-208ENST00000439029 C2orf16Q68DN1 1984 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 KDM3AQ9Y4C1 1321 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 SMIM35A0A1B0GVV1 85 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMPD4-208ENST00000439029 MS4A1P11836 297 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 TGM1P22735 817 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 FAM189BP81408 668 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 LPAL2Q16609 132 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 KIZQ2M2Z5 673 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 MCMDC2Q4G0Z9 681 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 CLLU1OSQ5K130 101 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 GIMAP8Q8ND71 665 aaPredicted RBP11.19□□□□□ -0.62
SMPD4-208ENST00000439029 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 HELQQ8TDG4 1101 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 ATRIPQ8WXE1 791 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 ZBP1Q9H171 429 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 SFXN1Q9H9B4 322 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 ZFYVE26Q68DK2 2539 aa11.19□□□□□ -0.62
SMPD4-208ENST00000439029 GPR182O15218 404 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 RPLP2P05387 115 aaKnown RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 SRFP11831 508 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 ITGB5P18084 799 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 KLRC1P26715 233 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 BCAR1P56945 870 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 DMWDQ09019 674 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 DSC3Q14574 896 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 BMS1Q14692 1282 aaKnown RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 PTPN14Q15678 1187 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 CCDC178Q5BJE1 867 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 PCNX4Q63HM2 1172 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 TSSK4Q6SA08 328 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 KIAA0319LQ8IZA0 1049 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 NME8Q8N427 588 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 PJA1Q8NG27 643 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 BCL7CQ8WUZ0 217 aaPredicted RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 SECISBP2LQ93073 1101 aaKnown RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 TMEM169Q96HH4 297 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 MYADMQ96S97 322 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.18□□□□□ -0.62
SMPD4-208ENST00000439029 EVPLQ92817 2033 aa11.18□□□□□ -0.62
SMPD4-208ENST00000439029 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
SMPD4-208ENST00000439029 ZNF213O14771 459 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 452 ms