RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 SNW1Q13573 536 aaKnown RBP20.46■□□□□ 0.87
HDAC6-208ENST00000438518 PADI6Q6TGC4 694 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 MTHFD1LQ6UB35 978 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 KRBA2Q6ZNG9 492 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 MTRQ99707 1265 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 HOOK1Q9UJC3 728 aaKnown RBP20.46■□□□□ 0.87
HDAC6-208ENST00000438518 PCDHA2Q9Y5H9 948 aa20.46■□□□□ 0.87
HDAC6-208ENST00000438518 KIAA0100Q14667 2235 aaKnown RBP20.46■□□□□ 0.87
HDAC6-208ENST00000438518 SMIM35A0A1B0GVV1 85 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 TMEM150BA6NC51 233 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 CYP11B2P19099 503 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 KLRC1P26715 233 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 DNM2P50570 870 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 IGBP1P78318 339 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 MCM6Q14566 821 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 MARCH8Q5T0T0 291 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
HDAC6-208ENST00000438518 RINT1Q6NUQ1 792 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 ODF2LQ9ULJ1 636 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 NOD1Q9Y239 953 aa20.45■□□□□ 0.86
HDAC6-208ENST00000438518 CCDC85CA6NKD9 419 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 CAND2O75155 1236 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 SSBP05455 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
HDAC6-208ENST00000438518 LIG1P18858 919 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 CDC42EP1Q00587 391 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 PTK7Q13308 1070 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 EMC2Q15006 297 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 PTGISQ16647 500 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 LONRF3Q496Y0 759 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 CNNM4Q6P4Q7 775 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 C1orf186Q6ZWK4 172 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 RPAINQ86UA6 219 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 FAM126BQ8IXS8 530 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 LRRC15Q8TF66 581 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 DRC1Q96MC2 740 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 PDLIM7Q9NR12 457 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 SERTAD1Q9UHV2 236 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 KCNG1Q9UIX4 513 aa20.44■□□□□ 0.86
HDAC6-208ENST00000438518 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
HDAC6-208ENST00000438518 NR1I2O75469 434 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 CYP2C9P11712 490 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 IER5Q5VY09 327 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 RSPH3Q86UC2 560 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 SERINC5Q86VE9 423 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 GPBP1Q86WP2 473 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 NME8Q8N427 588 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 CCDC155Q8N6L0 562 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 LINC01465Q8N7H1 131 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 TRAPPC12Q8WVT3 735 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 KIFAP3Q92845 792 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 MAP7D2Q96T17 732 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 C17orf75Q9HAS0 396 aa20.43■□□□□ 0.86
HDAC6-208ENST00000438518 A0A087WWV3 80 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 DCDC2CA8MYV0 355 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 ASAP2O43150 1006 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 TREHO43280 583 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 CD4P01730 458 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 KRT18P05783 430 aaKnown RBP20.42■□□□□ 0.86
HDAC6-208ENST00000438518 RTP1P59025 263 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 EFCAB12Q6NXP0 572 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 SH2D3AQ9BRG2 576 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 DACT1Q9NYF0 836 aa20.42■□□□□ 0.86
HDAC6-208ENST00000438518 TRIP12Q14669 1992 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-208ENST00000438518 MYH11P35749 1972 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 B4GALT4O60513 344 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 ATN1P54259 1190 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-208ENST00000438518 HIC1Q14526 733 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 DHX8Q14562 1220 aaKnown RBP20.41■□□□□ 0.86
HDAC6-208ENST00000438518 MXD4Q14582 209 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-208ENST00000438518 METTL13Q8N6R0 699 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 CAGE1Q8TC20 777 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 PSPC1Q8WXF1 523 aaKnown RBP20.41■□□□□ 0.86
HDAC6-208ENST00000438518 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 C7orf25Q9BPX7 421 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 HTATIP2Q9BUP3 242 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 RUSC1Q9BVN2 902 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 TRIM9Q9C026 710 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 XPNPEP1Q9NQW7 623 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 EVPLQ92817 2033 aa20.41■□□□□ 0.86
HDAC6-208ENST00000438518 SCP2P22307 547 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 SOX10P56693 466 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 RBL2Q08999 1139 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 SKOR2Q2VWA4 1001 aaPredicted RBP20.4■□□□□ 0.86
HDAC6-208ENST00000438518 TRIM60Q495X7 471 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 ARSHQ5FYA8 562 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 DDX12PQ92771 950 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 SUGCTQ9HAC7 445 aa20.4■□□□□ 0.86
HDAC6-208ENST00000438518 TRMT13Q9NUP7 481 aaKnown RBP20.4■□□□□ 0.86
HDAC6-208ENST00000438518 MYMKA6NI61 221 aa20.39■□□□□ 0.85
HDAC6-208ENST00000438518 GTPBP6O43824 516 aaPredicted RBP20.39■□□□□ 0.85
HDAC6-208ENST00000438518 PQBP1O60828 265 aaKnown RBP20.39■□□□□ 0.85
HDAC6-208ENST00000438518 TBCAO75347 108 aaKnown RBP20.39■□□□□ 0.85
HDAC6-208ENST00000438518 ARL2P36404 184 aa20.39■□□□□ 0.85
HDAC6-208ENST00000438518 BFSP2Q13515 415 aa20.39■□□□□ 0.85
HDAC6-208ENST00000438518 GIT2Q14161 759 aa20.39■□□□□ 0.85
HDAC6-208ENST00000438518 POSTNQ15063 836 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms