RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 MTMR6Q9Y217 621 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 GINS2Q9Y248 185 aa18.3■□□□□ 0.52
CTSD-205ENST00000438213 EVPLQ92817 2033 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 IGKV6-21A0A0C4DH24 114 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 RPA1P27694 616 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 CRYBB1P53674 252 aaPredicted RBP18.29■□□□□ 0.52
CTSD-205ENST00000438213 POLGP54098 1239 aaPredicted RBP18.29■□□□□ 0.52
CTSD-205ENST00000438213 ATP2C1P98194 919 aaPredicted RBP18.29■□□□□ 0.52
CTSD-205ENST00000438213 LPIN1Q14693 890 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 PLA2G4FQ68DD2 849 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 TSHZ1Q6ZSZ6 1077 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 CATSPER3Q86XQ3 398 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 LINC01465Q8N7H1 131 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 IGSF22Q8N9C0 903 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 SLC9A7Q96T83 725 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 MSRAQ9UJ68 235 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
CTSD-205ENST00000438213 ZBTB39O15060 712 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 GAS2O43903 313 aaKnown RBP18.28■□□□□ 0.52
CTSD-205ENST00000438213 VTNP04004 478 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 SPATA31C1P0DKV0 1188 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 CCT6AP40227 531 aaKnown RBP18.28■□□□□ 0.52
CTSD-205ENST00000438213 NLRP11P59045 1033 aaKnown RBP18.28■□□□□ 0.52
CTSD-205ENST00000438213 BECN1Q14457 450 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 KRT79Q5XKE5 535 aa18.28■□□□□ 0.52
CTSD-205ENST00000438213 GPR32O75388 356 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 MED24O75448 989 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 WDR5P61964 334 aaKnown RBP18.27■□□□□ 0.52
CTSD-205ENST00000438213 RESTQ13127 1097 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 RAB30Q15771 203 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 SPRYD3Q8NCJ5 442 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 PIGOQ8TEQ8 1089 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 SCLT1Q96NL6 688 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 FTHL17Q9BXU8 183 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 OSBPL7Q9BZF2 842 aa18.27■□□□□ 0.52
CTSD-205ENST00000438213 DHX33Q9H6R0 707 aaKnown RBP18.27■□□□□ 0.52
CTSD-205ENST00000438213 SUCLA2Q9P2R7 463 aaPredicted RBP18.27■□□□□ 0.52
CTSD-205ENST00000438213 GRXCR1A8MXD5 290 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 GPR182O15218 404 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 RPS6KA5O75582 802 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 AMHP03971 560 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 CD52P31358 61 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 PAK2Q13177 524 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 SF3A1Q15459 793 aaKnown RBP18.26■□□□□ 0.51
CTSD-205ENST00000438213 TCTN1Q2MV58 587 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 FAM109BQ6ICB4 259 aaPredicted RBP18.26■□□□□ 0.51
CTSD-205ENST00000438213 ZNF579Q8NAF0 562 aaKnown RBP18.26■□□□□ 0.51
CTSD-205ENST00000438213 ZBED2Q9BTP6 218 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 AGO3Q9H9G7 860 aaKnown RBP18.26■□□□□ 0.51
CTSD-205ENST00000438213 CDHR5Q9HBB8 845 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 DBR1Q9UK59 544 aaKnown RBP18.26■□□□□ 0.51
CTSD-205ENST00000438213 PADI3Q9ULW8 664 aa18.26■□□□□ 0.51
CTSD-205ENST00000438213 VWA3AA6NCI4 1184 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 ASAP2O43150 1006 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 DGAT1O75907 488 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 RARRES1P49788 294 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 GPC3P51654 580 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 NFX1Q12986 1120 aaKnown RBP18.25■□□□□ 0.51
CTSD-205ENST00000438213 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
CTSD-205ENST00000438213 IL17AQ16552 155 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 HERC6Q8IVU3 1022 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 SNX29Q8TEQ0 813 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 NLRP7Q8WX94 980 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 PPP1R16BQ96T49 567 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 OSMRQ99650 979 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 INO80BQ9C086 356 aaPredicted RBP18.25■□□□□ 0.51
CTSD-205ENST00000438213 ADAMTS10Q9H324 1103 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 PCDHA11Q9Y5I1 949 aa18.25■□□□□ 0.51
CTSD-205ENST00000438213 ENPP3O14638 875 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 EIF4BP23588 611 aaKnown RBP18.24■□□□□ 0.51
CTSD-205ENST00000438213 DNAJB2P25686 324 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 DRP2Q13474 957 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 EMC2Q15006 297 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 ZNF697Q5TEC3 545 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 ZNF410Q86VK4 478 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 RHPN2Q8IUC4 686 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
CTSD-205ENST00000438213 TIFAQ96CG3 184 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 AK8Q96MA6 479 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 MTRQ99707 1265 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 PBX4Q9BYU1 374 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 GCOM2Q9BZD3 368 aaPredicted RBP18.24■□□□□ 0.51
CTSD-205ENST00000438213 ATP6V0A4Q9HBG4 840 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 ST3GAL5Q9UNP4 418 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 KIAA1024Q9UPX6 916 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 DNM3Q9UQ16 869 aa18.24■□□□□ 0.51
CTSD-205ENST00000438213 NOC2LQ9Y3T9 749 aaKnown RBP18.24■□□□□ 0.51
CTSD-205ENST00000438213 TMEM265A0A087WTH1 108 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 A0A087WWV3 80 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 MXD4Q14582 209 aaPredicted RBP18.23■□□□□ 0.51
CTSD-205ENST00000438213 POTEGQ6S5H5 508 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTSD-205ENST00000438213 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 KCTD17Q8N5Z5 321 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 PRPF31Q8WWY3 499 aaKnown RBP18.23■□□□□ 0.51
CTSD-205ENST00000438213 TMEM143Q96AN5 459 aa18.23■□□□□ 0.51
CTSD-205ENST00000438213 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
CTSD-205ENST00000438213 CLIC4Q9Y696 253 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms