RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SPIRE1Q08AE8 756 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 HOOK2Q96ED9 719 aa18.23■□□□□ 0.51
TTC3-209ENST00000438055 INPP4AQ96PE3 977 aaPredicted RBP18.23■□□□□ 0.51
TTC3-209ENST00000438055 GAP43P17677 238 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 GALCP54803 685 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 MARSP56192 900 aaKnown RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 C10orf76Q5T2E6 689 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 MCTP2Q6DN12 878 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 KRT27Q7Z3Y8 459 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 COL23A1Q86Y22 540 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 HOMER2Q9NSB8 354 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 ASTN1O14525 1302 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 CHRNA5P30532 468 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 EPHA7Q15375 998 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 Q4G0T1 1027 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 RNF187Q5TA31 235 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 SIAH1Q8IUQ4 282 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 MKL1Q969V6 931 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 PBKQ96KB5 322 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 PRMT6Q96LA8 375 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 OSGEPQ9NPF4 335 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 PLCB1Q9NQ66 1216 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 AJAP1Q9UKB5 411 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 A0A1W2PRG0 241 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 PPIP5K2O43314 1243 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 FGGP02679 453 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 ITGA4P13612 1032 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 HOXD13P35453 343 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 STRIP1Q5VSL9 837 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 MOXD1Q6UVY6 613 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 LENG9Q96B70 501 aa18.22■□□□□ 0.51
TTC3-209ENST00000438055 TAF1DQ9H5J8 278 aaPredicted RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 PPANQ9NQ55 473 aaKnown RBP18.22■□□□□ 0.51
TTC3-209ENST00000438055 K7ENM7 598 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 MYZAPP0CAP1 466 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 NR1D1P20393 614 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 ZNF211Q13398 564 aaPredicted RBP18.21■□□□□ 0.51
TTC3-209ENST00000438055 LLGL1Q15334 1064 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 TTC31Q49AM3 519 aaPredicted RBP18.21■□□□□ 0.51
TTC3-209ENST00000438055 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 TPCN2Q8NHX9 752 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 CCDC26Q8TAB7 109 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 WHAMMQ8TF30 809 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 STK24Q9Y6E0 443 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 SMIM23A6NLE4 172 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 DAPK3O43293 454 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 FOXR2Q6PJQ5 311 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 RUBCNQ92622 972 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 CAVIN3Q969G5 261 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
TTC3-209ENST00000438055 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 TMEM51Q9NW97 253 aa18.21■□□□□ 0.51
TTC3-209ENST00000438055 EIF3HO15372 352 aaKnown RBP eCLIP18.21■□□□□ 0.52e-6■■□□□ 12.9
TTC3-209ENST00000438055 COPB2P35606 906 aa18.21■□□□□ 0.5
TTC3-209ENST00000438055 JAG1P78504 1218 aa18.21■□□□□ 0.5
TTC3-209ENST00000438055 MYL7Q01449 175 aa18.21■□□□□ 0.5
TTC3-209ENST00000438055 GDF3Q9NR23 364 aa18.21■□□□□ 0.5
TTC3-209ENST00000438055 CTTNBP2NLQ9P2B4 639 aa18.21■□□□□ 0.5
TTC3-209ENST00000438055 CHORDC1Q9UHD1 332 aaPredicted RBP18.21■□□□□ 0.5
TTC3-209ENST00000438055 DDX3XO00571 662 aaKnown RBP eCLIP18.2■□□□□ 0.58e-8■■■■■ 36.6
TTC3-209ENST00000438055 APBA3O96018 575 aa18.2■□□□□ 0.5
TTC3-209ENST00000438055 ERVK-9P63128 1117 aa18.2■□□□□ 0.5
TTC3-209ENST00000438055 ZNF572Q7Z3I7 529 aaPredicted RBP18.2■□□□□ 0.5
TTC3-209ENST00000438055 LRRC45Q96CN5 670 aa18.2■□□□□ 0.5
TTC3-209ENST00000438055 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.53e-8■■□□□ 11.5
TTC3-209ENST00000438055 FRMD3A2A2Y4 597 aa18.2■□□□□ 0.5
TTC3-209ENST00000438055 CETN1Q12798 172 aa18.2■□□□□ 0.5
TTC3-209ENST00000438055 UTP11Q9Y3A2 253 aaKnown RBP18.2■□□□□ 0.5
TTC3-209ENST00000438055 CTDP1Q9Y5B0 961 aaPredicted RBP18.2■□□□□ 0.5
TTC3-209ENST00000438055 ZNF233A6NK53 670 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 TTI1O43156 1089 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 RPS6KA5O75582 802 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 CCDC172P0C7W6 258 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 POLD1P28340 1107 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 FMO5P49326 533 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 NACC1Q96RE7 527 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 FAM169AQ9Y6X4 670 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 TLDC2A0PJX2 215 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 RAD17O75943 681 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 ERLIN2O94905 339 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 SLITRK3O94933 977 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 DACT2Q5SW24 774 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 RNPC3Q96LT9 517 aaKnown RBP18.19■□□□□ 0.5
TTC3-209ENST00000438055 SCAF8Q9UPN6 1271 aaKnown RBP18.19■□□□□ 0.5
TTC3-209ENST00000438055 E7EVH7 732 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 TGFB1I1O43294 461 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 SOX5P35711 763 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 PRELPP51888 382 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 SF3A3Q12874 501 aaKnown RBP eCLIP18.19■□□□□ 0.51e-6■■□□□ 11.7
TTC3-209ENST00000438055 ZNF746Q6NUN9 644 aaPredicted RBP18.19■□□□□ 0.5
TTC3-209ENST00000438055 LXNQ9BS40 222 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 POLR3CQ9BUI4 534 aaPredicted RBP18.19■□□□□ 0.5
TTC3-209ENST00000438055 WDR18Q9BV38 432 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 VAV3Q9UKW4 847 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 EP400Q96L91 3159 aa18.19■□□□□ 0.5
TTC3-209ENST00000438055 GOLGA6L10A0A0M3HER8 536 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms