RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ABL1P00519 1130 aa28.2■■■□□ 2.11
CPNE1-216ENST00000437340 PSMC2P35998 433 aaKnown RBP28.2■■■□□ 2.11
CPNE1-216ENST00000437340 MAPK8IP2Q13387 824 aaPredicted RBP28.2■■■□□ 2.11
CPNE1-216ENST00000437340 MYBPC2Q14324 1141 aa28.2■■■□□ 2.11
CPNE1-216ENST00000437340 SPA17Q15506 151 aa28.2■■■□□ 2.11
CPNE1-216ENST00000437340 CCDC43Q96MW1 224 aaKnown RBP28.2■■■□□ 2.11
CPNE1-216ENST00000437340 MOV10L1Q9BXT6 1211 aaKnown RBP28.2■■■□□ 2.11
CPNE1-216ENST00000437340 CGNQ9P2M7 1197 aaKnown RBP28.2■■■□□ 2.11
CPNE1-216ENST00000437340 NFASCO94856 1347 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 EFCAB8A8MWE9 144 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 CLIC2O15247 247 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 CCDC122Q5T0U0 273 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 SMAP1Q8IYB5 467 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-216ENST00000437340 PDCL2Q8N4E4 241 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 BORCS6Q96GS4 357 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 NAPGQ99747 312 aaPredicted RBP28.19■■■□□ 2.1
CPNE1-216ENST00000437340 CARD6Q9BX69 1037 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 TSGA10Q9BZW7 698 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 DMAC2Q9NW81 257 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 GUCA1BQ9UMX6 200 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 PCDHA10Q9Y5I2 948 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 VAV2P52735 878 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 PLS1Q14651 629 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 SLC9A9Q8IVB4 645 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 JAKMIP2Q96AA8 810 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 OTUD5Q96G74 571 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 IWS1Q96ST2 819 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 GANQ9H2C0 597 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 AGPAT3Q9NRZ7 376 aa28.19■■■□□ 2.1
CPNE1-216ENST00000437340 GTPBP10A4D1E9 387 aaKnown RBP28.18■■■□□ 2.1
CPNE1-216ENST00000437340 DKC1O60832 514 aaKnown RBP eCLIP28.18■■■□□ 2.1
CPNE1-216ENST00000437340 TADA3O75528 432 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 PLS3P13797 630 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 KCNA2P16389 499 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 CASP4P49662 377 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 POLR2FP61218 127 aaKnown RBP28.18■■■□□ 2.1
CPNE1-216ENST00000437340 HSP90AA2PQ14568 343 aaPredicted RBP28.18■■■□□ 2.1
CPNE1-216ENST00000437340 UGCGQ16739 394 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 SFMBT2Q5VUG0 894 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 LBX2Q6XYB7 198 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 ERO1BQ86YB8 467 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 SLC17A8Q8NDX2 589 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 TMEM174Q8WUU8 243 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 SLC35C1Q96A29 364 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 DRC1Q96MC2 740 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 CRACR2AQ9BSW2 395 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 ST6GALNAC4Q9H4F1 302 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 TMEM206Q9H813 350 aa28.18■■■□□ 2.1
CPNE1-216ENST00000437340 SPDYE5A6NIY4 337 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 EIF4A3P38919 411 aaKnown RBP28.17■■■□□ 2.1
CPNE1-216ENST00000437340 KIF11P52732 1056 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 PPATQ06203 517 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 ELF2Q15723 593 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 GNPTABQ3T906 1256 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 FAM186BQ8IYM0 893 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 DNERQ8NFT8 737 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 DEF6Q9H4E7 631 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 CDC23Q9UJX2 597 aa28.17■■■□□ 2.1
CPNE1-216ENST00000437340 RGS20O76081 388 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 PLEKP08567 350 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 SLC9C1Q4G0N8 1177 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 LDLRAD1Q5T700 205 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 HGSNATQ68CP4 663 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 LRRN4CLQ8ND94 238 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 NLRC4Q9NPP4 1024 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 FBXO40Q9UH90 709 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 FBXL5Q9UKA1 691 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 V9GYY5 206 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 TRPM7Q96QT4 1865 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 K7ENM7 598 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 IRF6O14896 467 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 USO1O60763 962 aaKnown RBP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 SERPING1P05155 500 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 KIF5AQ12840 1032 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 EXOC3L4Q17RC7 722 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 ASTE1Q2TB18 679 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 TXLNBQ8N3L3 684 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 PROCA1Q8NCQ7 364 aaPredicted RBP28.16■■■□□ 2.1
CPNE1-216ENST00000437340 UBXN4Q92575 508 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 AIPL1Q9NZN9 384 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 FRMD4BQ9Y2L6 1034 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 MYH11P35749 1972 aa28.16■■■□□ 2.1
CPNE1-216ENST00000437340 ZNF263O14978 683 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 AKR1B10O60218 316 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 ERCC6LQ2NKX8 1250 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 DCAF17Q5H9S7 520 aaPredicted RBP28.15■■■□□ 2.1
CPNE1-216ENST00000437340 TREML2Q5T2D2 321 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 DPY19L2P1Q6NXN4 242 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 ATP6V0A1Q93050 837 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 MYO6Q9UM54 1294 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 PFASO15067 1338 aa28.15■■■□□ 2.1
CPNE1-216ENST00000437340 BACH1O14867 736 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 TCERG1LQ5VWI1 586 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 GBP6Q6ZN66 633 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 OTUD6AQ7L8S5 288 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 RIOX2Q8IUF8 465 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 TRIM10Q9UDY6 481 aa28.14■■■□□ 2.1
CPNE1-216ENST00000437340 SPATA31C2B4DYI2 1134 aa28.14■■■□□ 2.09
CPNE1-216ENST00000437340 SNRPFP62306 86 aaKnown RBP28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms