RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 PAEPP09466 180 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 CHN1P15882 459 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 GABPAQ06546 454 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 LRRC55Q6ZSA7 311 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 KCTD1Q719H9 257 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 TMC3Q7Z5M5 1100 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 MYOCDQ8IZQ8 938 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 SERPINB13Q9UIV8 391 aa13.45□□□□□ -0.26
TMEM116-202ENST00000437003 PVALEFA0A1B0GWK0 134 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 MMEP08473 750 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 COASYQ13057 564 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 BIRC2Q13490 618 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 ANKS4BQ8N8V4 417 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 ELAC2Q9BQ52 826 aaKnown RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 MTFR1LQ9H019 292 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 KIF9Q9HAQ2 790 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 DDX4Q9NQI0 724 aaKnown RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 CEP72Q9P209 647 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 EME2A4GXA9 379 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 E9PMD0 336 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 F8VZ95 297 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 IFNAR2P48551 515 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 LRRC63Q05C16 580 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 MTMR3Q13615 1198 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 PDIA5Q14554 519 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 ERMARDQ5T6L9 678 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
TMEM116-202ENST00000437003 ADGRF4Q8IZF3 695 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 METTL13Q8N6R0 699 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 AGAP11Q8TF27 550 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 SCFD2Q8WU76 684 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 HOOK2Q96ED9 719 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 TSPAN18Q96SJ8 248 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 TRIM51Q9BSJ1 452 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 JMJD4Q9H9V9 463 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
TMEM116-202ENST00000437003 PNMA6FA0A0J9YX94 578 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PPP1R11O60927 126 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 SHBGP04278 402 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 SNHG28P0DPA3 235 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 GHRP10912 638 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 LRRC34Q8IZ02 419 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 MICAL1Q8TDZ2 1067 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 CRAMP1Q96RY5 1269 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 FAM129AQ9BZQ8 928 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PCDHA12Q9UN75 941 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 C15orf41Q9Y2V0 281 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 CD2APQ9Y5K6 639 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PLIN4Q96Q06 1357 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 DIAPH2O60879 1101 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 KCNJ2P63252 427 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 ZNF543Q08ER8 600 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 FAM26FQ5R3K3 315 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PRCCQ92733 491 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 ABCF3Q9NUQ8 709 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 USP40Q9NVE5 1235 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 AGAP1Q9UPQ3 857 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 KIAA1024Q9UPX6 916 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 THSD7AQ9UPZ6 1657 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 ENO4A6NNW6 628 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 COPB2P35606 906 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 EPS15P42566 896 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 SCNN1DP51172 638 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 SLC8A3P57103 927 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 MTA1Q13330 715 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 P3H4Q92791 437 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 MXD3Q9BW11 206 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
TMEM116-202ENST00000437003 COA1Q9GZY4 146 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 CCDC113Q9H0I3 377 aa13.43□□□□□ -0.26
TMEM116-202ENST00000437003 IGKV6D-41A0A0C4DH26 115 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 POTECB2RU33 542 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L10C9JJH3 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 KRT18P05783 430 aaKnown RBP13.42□□□□□ -0.26
TMEM116-202ENST00000437003 USP11P51784 963 aa13.42□□□□□ -0.26
TMEM116-202ENST00000437003 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms