RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 ABHD10Q9NUJ1 306 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 LARSQ9P2J5 1176 aaKnown RBP23.24■■□□□ 1.31
PTPRF-207ENST00000436724 SOWAHDA6NJG2 315 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 K7ENM7 598 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 ARHGAP6O43182 974 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 NR3C1P04150 777 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 TRIM14Q14142 442 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 FAM102BQ5T8I3 360 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 ANKRD23Q86SG2 305 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 ERGIC2Q96RQ1 377 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 SEPT9Q9UHD8 586 aaPredicted RBP23.24■■□□□ 1.31
PTPRF-207ENST00000436724 PAXBP1Q9Y5B6 917 aa23.24■■□□□ 1.31
PTPRF-207ENST00000436724 MYH9P35579 1960 aaKnown RBP23.23■■□□□ 1.31
PTPRF-207ENST00000436724 TRIM21P19474 475 aaKnown RBP23.23■■□□□ 1.31
PTPRF-207ENST00000436724 ATP4AP20648 1035 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 CASP4P49662 377 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 HUNKP57058 714 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 NYAP1Q6ZVC0 841 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 TRIM59Q8IWR1 403 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 FBXO16Q8IX29 292 aaPredicted RBP23.23■■□□□ 1.31
PTPRF-207ENST00000436724 SHCBP1Q8NEM2 672 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 STRA6Q9BX79 667 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 KCND1Q9NSA2 647 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 AGPAT5Q9NUQ2 364 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 SLC45A1Q9Y2W3 748 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 PPP1R37O75864 691 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 AKAP3O75969 853 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 ATG7O95352 703 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 GGPS1O95749 300 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 ZBTB48P10074 688 aaPredicted RBP23.23■■□□□ 1.31
PTPRF-207ENST00000436724 PLS3P13797 630 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 KCNJ6P48051 423 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 MARSP56192 900 aaKnown RBP23.23■■□□□ 1.31
PTPRF-207ENST00000436724 TOGARAM2Q6ZUX3 1019 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 OTUD6AQ7L8S5 288 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 TTYH3Q9C0H2 523 aa23.23■■□□□ 1.31
PTPRF-207ENST00000436724 IGSF9BQ9UPX0 1349 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 GNA14O95837 355 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 PEX3P56589 373 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 TMEM63BQ5T3F8 832 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 PPP1R13BQ96KQ4 1090 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 PCDHB13Q9Y5F0 798 aa23.22■■□□□ 1.31
PTPRF-207ENST00000436724 GSTTP1A0A1W2PQM5 241 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 GTF3C2Q8WUA4 911 aaPredicted RBP23.21■■□□□ 1.31
PTPRF-207ENST00000436724 ANKRD7Q92527 254 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 ZNF302Q9NR11 478 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 SIK3Q9Y2K2 1263 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 ARID2Q68CP9 1835 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 EPHB6O15197 1021 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 CCNA1P78396 465 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 DRC1Q96MC2 740 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 DESI2Q9BSY9 194 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 FAM207AQ9NSI2 230 aaPredicted RBP23.21■■□□□ 1.31
PTPRF-207ENST00000436724 CAPN11Q9UMQ6 739 aa23.21■■□□□ 1.31
PTPRF-207ENST00000436724 LUC7L2Q9Y383 392 aaKnown RBP23.21■■□□□ 1.31
PTPRF-207ENST00000436724 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.21■■□□□ 1.31
PTPRF-207ENST00000436724 MAFBQ9Y5Q3 323 aaPredicted RBP23.21■■□□□ 1.31
PTPRF-207ENST00000436724 DKC1O60832 514 aaKnown RBP eCLIP23.2■■□□□ 1.31e-7■■■■■ 32
PTPRF-207ENST00000436724 TGFB3P10600 412 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 NEDD9Q14511 834 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 RAD9BQ6WBX8 426 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 STXBP4Q6ZWJ1 553 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 PCYT2Q99447 389 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 MPHOSPH6Q99547 160 aaKnown RBP23.2■■□□□ 1.3
PTPRF-207ENST00000436724 CYP26B1Q9NR63 512 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 DDX41Q9UJV9 622 aaKnown RBP23.2■■□□□ 1.3
PTPRF-207ENST00000436724 SLC16A4O15374 487 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 ADORA2AP29274 412 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 MTERF2Q49AM1 385 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 CCDC51Q96ER9 411 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 KIFC3Q9BVG8 833 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 MMRN2Q9H8L6 949 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 PDGFCQ9NRA1 345 aa23.2■■□□□ 1.3
PTPRF-207ENST00000436724 TISP43B9A030 160 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 RPL13P26373 211 aaKnown RBP23.19■■□□□ 1.3
PTPRF-207ENST00000436724 PTPN14Q15678 1187 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 XKR3Q5GH77 459 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 SYCP3Q8IZU3 236 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 BSNDQ8WZ55 320 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 ARID3AQ99856 593 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 MLXIPQ9HAP2 919 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 XPNPEP1Q9NQW7 623 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 AGPAT3Q9NRZ7 376 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 ARMCX3Q9UH62 379 aaPredicted RBP23.19■■□□□ 1.3
PTPRF-207ENST00000436724 UBE4BO95155 1302 aa23.19■■□□□ 1.3
PTPRF-207ENST00000436724 IGKV6D-21A0A0A0MT36 114 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 ECM2O94769 699 aaPredicted RBP23.18■■□□□ 1.3
PTPRF-207ENST00000436724 GCLCP48506 637 aaPredicted RBP23.18■■□□□ 1.3
PTPRF-207ENST00000436724 KCNMA1Q12791 1236 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 HSDL1Q3SXM5 330 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 CHADLQ6NUI6 762 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 METTL7BQ6UX53 244 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 HAUS6Q7Z4H7 955 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 COPS5Q92905 334 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 TIPINQ9BVW5 301 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 PLXNB2O15031 1838 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 TCF7P36402 384 aaPredicted RBP23.18■■□□□ 1.3
PTPRF-207ENST00000436724 HS2ST1Q7LGA3 356 aa23.18■■□□□ 1.3
PTPRF-207ENST00000436724 CRACR2AQ9BSW2 395 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms