RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 OSMRQ99650 979 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ZNF577Q9BSK1 485 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 IGFLR1Q9H665 355 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TBC1D22BQ9NU19 505 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 RNF19AQ9NV58 838 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TMEM161AQ9NX61 479 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 LRFN2Q9ULH4 789 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 BARX2Q9UMQ3 279 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 GINS2Q9Y248 185 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 KAT6AQ92794 2004 aa12.43□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 DENND3A2RUS2 1198 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TBKBP1A7MCY6 615 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CDC45O75419 566 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 FGF18O76093 207 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ZNF76P36508 570 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 NTRK3Q16288 839 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 DUSP6Q16828 381 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CSPP1Q1MSJ5 1256 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TMEM184AQ6ZMB5 413 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 COLGALT1Q8NBJ5 622 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 RASGRP4Q8TDF6 673 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 FBXL18Q96ME1 805 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CDCA3Q99618 268 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ADAMTS10Q9H324 1103 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CWH43Q9H720 699 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TLR9Q9NR96 1032 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CEP131Q9UPN4 1083 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 LZTS1Q9Y250 596 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 USP15Q9Y4E8 981 aaPredicted RBP12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PCDHA10Q9Y5I2 948 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TECTAO75443 2155 aa12.42□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PRPF3O43395 683 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ZNF862O60290 1169 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 VTNP04004 478 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 FGFR1P11362 822 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ATF7P17544 494 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 RBM10P98175 930 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PLCB3Q01970 1234 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 NHLH1Q02575 133 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 APOBRQ0VD83 1088 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PRR16Q569H4 304 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ZNF710Q8N1W2 664 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CCDC12Q8WUD4 166 aaPredicted RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 FAM167AQ96KS9 214 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PPP1R16BQ96T49 567 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 C6orf50Q9HD87 102 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 AAASQ9NRG9 546 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TYW1Q9NV66 732 aaKnown RBP12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PCDHB12Q9Y5F1 795 aa12.41□□□□□ -0.42
SPTLC1P4-201ENST00000435997 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 WDR64B1ANS9 1081 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 MAGEB2O15479 319 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PSAPP07602 524 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CPA1P15085 419 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 LAG3P18627 525 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 GNA11P29992 359 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 HSPA4P34932 840 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CLCN3P51790 818 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 EVCP57679 992 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ERVFC1P60507 584 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 Q6ZUG5 572 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 RBM23Q86U06 439 aaKnown RBP12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 LRRC43Q8N309 656 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 EDAQ92838 391 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 BRF1Q92994 677 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 CASD1Q96PB1 797 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 UIMC1Q96RL1 719 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 RNF26Q9BY78 433 aaPredicted RBP12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TMEM117Q9H0C3 514 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 TLE6Q9H808 572 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 ATP6V0A4Q9HBG4 840 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 GABBR1Q9UBS5 961 aa12.4□□□□□ -0.42
SPTLC1P4-201ENST00000435997 PER2O15055 1255 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 HOXA2O43364 376 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 OATP04181 439 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 EIF4BP23588 611 aaKnown RBP12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 GPC3P51654 580 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PRKCEQ02156 737 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 TARBP2Q15633 366 aaKnown RBP12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 UGCGQ16739 394 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 B3GNT9Q6UX72 402 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CKAP2LQ8IYA6 745 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 THNSL1Q8IYQ7 743 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CCDC148Q8NFR7 591 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MRPS27Q92552 414 aaKnown RBP12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 SLC5A5Q92911 643 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 PHKBQ93100 1093 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 JAKMIP1Q96N16 626 aaKnown RBP12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
SPTLC1P4-201ENST00000435997 RIT2Q99578 217 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms